Phragmites australis (common reed): 133924548
Help
Entry
133924548 CDS
T10575
Name
(RefSeq) CLIP-associated protein-like
KO
K16578
CLIP-associating protein 1/2
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
paua03036
]
133924548
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
paua04812
]
133924548
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
133924548
Cytoskeleton proteins [BR:
paua04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
133924548
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_EF3_N
CEP104-like_TOG
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
PDS5
Adaptin_N
TTI1
Sec7-like_HDS
INTS1_R4
MMS19_N
UTP20
Tti2
HEAT_DAAF5
MMS19_C
TAF6_C
Dopey_N
ARM_LIN
ELFV_dehydrog
Motif
Other DBs
NCBI-GeneID:
133924548
NCBI-ProteinID:
XP_062226123
LinkDB
All DBs
Position
7:complement(28103124..28114939)
Genome browser
AA seq
1443 aa
AA seq
DB search
MEAALEAARAKDTKERLAGVERLHEALDAAARRGLTVAEVTALVDTCMDLTRDANFRVAQ
GGLQALSAAAVVAGEHFKIHLNALVPAAVERLGDGKQPVRDAARQLLITLMEVSSPTIIV
ERAGSYAWTHKSWRVREEFVRAVATAVGLFASTEISLQRVLLSPVLQLMNDSNQSVREAA
ISCIEEMYKHMGSQFHEELQRHNLPSYMLKEINSRLDKIEPKVRSSDTVMQYKVSESRSV
SANPKRGSPRTKSTSRESTLFGGDTDMTEKPVEPVKVHSEKELLREFEKIAATLVPEKDW
SFRTAAMQRIEALVYGGAIDYPSFLMLLKQLVPPLSTQLSDRRSSIVKQACHLLNVLSKE
LLGDFEPCAELFIPMLFKLVVITVLVIAESADTCIKTILRNCKVARILPRIADTAKNDRS
AILRARCCEYALLILEYWADAPEIQRSADLYEDMIKCCVADAMSEVRATARTCYRMFAKT
WPERSRRLFMSFDPAIQRIINDEDGGVHKRYASPSLRDRVAQPSRASSHASGTHIPGYGT
SAIVAMDKSAAISSDSSFSSNSLRLSQSKTIGRSSERSLESVLNSSKEKVSAIESLLKGV
SISDRQNFAAARSTSLDLGVDPPSSRDPPVPLAAPASKLLSLQNSALLDSSLPAITGASS
RNGGYRLLDTMTTQVATKERSRSPYLSNISSESMSGLALPYLRRSSERLKEGGRMDETND
IRSTRRIPQMHMEKNYVDMPYRDATYRDSHNNHVPNFQRPLLRKQVMSRASASGRHSFDD
SHVPPGDVSGYTDSLASLNDALSEGLSPNSDWVVRVSAFDFIRNLLQQGQKGIQEITQNL
EKVMKLFFRHLDDPHHKVAQAAFSTLAEIIPACKKPFESYVERILPYVFSRLIDPKELVK
KPCSSTLEIVGQTYAIDMLLPALVRSLDEQRSPKAKLAVLEFANKSFSKYTVDSDGYSNS
GFLKLWLSKLAPLVNEKNAKLKEASISGIISVYSHFDSTAVLNFILSLSVEDQNLLRRAL
KQKTPRIEVDLVNYLQSKKERPRPKSYDQADFGTSSEDGYAFASKKSYPFGRYSSSSLDA
EGEKKMNTIQESTLHNVSIGRTTSDMNIDHAIQSLELSTGTEVLLNRSRESKNNSSSVVE
AARSWTNYPEKTDASLEGETATDTRVNFSRFLTSDGHNAAASTTGESVQEGDMIVNLSSI
KTSLHADNGLSIPQLLHQISNDTQVSSLEKLEALQQLADASLDNNSSIWAKYFNQILTAV
LEVLDDSDSSTRELALSLIAEMLNNQKDAIEDSIEIVLEKLLHVTKDVVAKISNEANQCL
NVLLVKYDPFRCLAVIVPLLVSDDEKILVVCINCLTKLVGRLSQEELIDQLPTFLPALFD
SFNNQSPDVRKTVVFCLVDIYIMLGKAFAPYLEGLSSTQLRLVTIYANRISQARSGKAID
SNQ
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcgctggaggcggcgcgcgccaaggacaccaaggagcggctggccggggtg
gagcggctgcacgaggcgctggacgcggcggcgcggcgggggctgacagtcgcggaggtc
acggcgttggtggacacctgcatggatctgacgcgggacgccaacttccgcgtcgcgcag
ggcgggctccaggcgctctccgccgccgccgtcgtcgccggcgagcactttaagatccac
ctcaacgccctggtccccgccgccgtcgagcgcctcggcgacggcaagcagcccgtccgt
gatgcagcgcggcagctcctcatcaccctgatggaggtttcttcgccaacgatcattgtt
gaaagagctggaagttatgcatggactcataaaagttggagggtgcgggaagaatttgta
cgtgcagtggcaactgctgttgggctatttgcttctacagagatatccttgcaacgagtt
ttgctttcacctgtcttgcaattgatgaatgattcaaaccaaagtgttagagaagctgct
atctcttgtattgaggagatgtacaagcacatgggatcacagtttcatgaagagttgcag
cgccataatctgccttcgtacatgctaaaagaaataaattcaaggttggataaaatagaa
ccaaaggttcgatcatctgatactgtaatgcagtataaggtttcagaatctagatctgtt
agtgccaatccgaaaagaggcagcccgaggacaaaaagcacatcaagggaaagtacatta
tttggaggtgacactgatatgacagaaaaaccagtggaaccagtgaaagttcattctgag
aaagaattacttcgggagtttgagaagattgcagctacccttgttccagaaaaggattgg
tcttttcgtactgctgccatgcaaaggattgaagccctggtctatggaggtgctattgat
tatccatcatttcttatgctattgaagcaactggttcctccattgtccactcaattgtct
gatcgacgttctagcattgtaaaacaggcatgtcatctacttaatgtactatccaaagaa
ctcctcggtgactttgagccatgtgccgaactattcatcccgatgctttttaagcttgtt
gtcataactgtgcttgtaatcgccgaatctgcggacacatgtataaaaactatcctgcgg
aactgcaaggttgcacggattcttcctcgcatagctgatacagcaaagaatgaccgaagt
gcaatccttcgtgcaaggtgctgtgaatatgcacttctaatattggagtattgggctgat
gcgccagaaatacaacgttcagctgatctatatgaagatatgataaaatgctgtgtagca
gacgcaatgagtgaggtccgtgcaactgcaagaacttgctatagaatgtttgcaaagaca
tggcctgagcggtcacgccggctttttatgtcattcgatcctgctatacagaggataata
aatgatgaagatggtggtgtgcacaaaaggtatgcttctccctcgttgcgtgatagggtt
gcgcagccttctcgtgcttcatcccatgcaagtggtacacatatacctggatatggcact
tcagctatcgttgcaatggacaagagtgcagctatttcatcagattcatctttttcatca
aacagtcttcgcttatcacagtcaaagacaattggcagaagttctgaaagaagcttggag
agtgtgcttaactccagcaaagaaaaagtttctgccattgaaagtttgctgaaaggtgtc
agcatatcagataggcaaaatttcgctgctgcacgctcaacaagcttggatcttggagtt
gatcctccatcatctcgtgatcctcctgtgccacttgcagcaccagcttcaaagcttctg
tccttgcagaactcagcactgttggattcatcccttcctgctatcacaggtgctagttca
cgaaatggaggttaccgcttattggatacaatgacaacacaagtggccaccaaggagcga
tcgagatcaccatatttgagtaatatatcatctgagtccatgtctggcttagcactgcct
tacttaagaagatcttcagagaggcttaaagaaggaggccgaatggacgagactaatgac
attcgttcaactaggcgaatccctcaaatgcacatggagaaaaactatgttgatatgcct
tatagggatgccacctacagagattcacataataaccatgtcccgaatttccagagacct
cttctaaggaagcaggtaatgtcaagggcatctgcaagtggcagacacagctttgatgat
agccatgtaccaccgggtgatgtgtctggctataccgattctctagcttctctaaatgat
gcactttcggagggtctcagccctaattctgattgggtagtaagagtttcagctttcgat
tttattcggaatttactgcaacaaggccagaaaggtattcaagaaattactcaaaatctt
gaaaaggtcatgaagctatttttccgtcatttggatgatcctcatcataaggttgcacag
gcagctttctctacacttgcagagattattccagcttgcaagaagccatttgaaagttat
gttgaaaggattttgccatatgtattttcccggcttattgatccaaaagagttggtgaaa
aaaccatgctcgtcaaccttggagattgttggtcaaacatatgctattgatatgttgcta
cctgcgcttgtacgctcattagatgaacagaggtccccaaaggcaaaattggctgttctt
gagtttgcaaataaatcattcagcaagtacactgtagattctgatggttatagtaacagt
ggcttccttaaattatggctttcaaaattggcacctttagtaaatgaaaagaacgcaaaa
ttgaaggaggcatctatttctggtatcatatccgtttattctcactttgattcaacagca
gtgctaaattttattctgagtttatcagttgaagatcaaaacctcttgaggcgagccctg
aagcaaaaaacccctcgtattgaggttgatctggtgaactacttgcagagcaagaaagaa
cgtccgcgccccaaatcttatgaccaggcagattttggaacttcttcagaggatggctat
gcatttgcatccaagaagagttatccttttgggcggtattcttctagttcccttgacgct
gaaggggaaaagaagatgaatacaatacaagaatcaacactgcataatgtctctataggt
cgaacgacttctgatatgaacatagatcatgctattcaaagcttggaactgtccacagga
actgaagttcttttaaatagaagtagagaatcaaagaacaatagtagctcagttgtggaa
gctgctcgatcttggacaaactatcctgaaaaaactgatgcctccttagagggtgaaact
gccactgatactcgggtaaatttcagccggtttcttacttctgatgggcataatgctgct
gcttcaaccactggagaaagtgttcaagagggagatatgattgtgaatcttagttctata
aagaccagcctacatgctgacaatgggctgagcataccgcaacttcttcatcagataagc
aatgatactcaagtttcaagcttggaaaagctggaagcattgcaacagttggctgatgct
tccctcgataacaacagctccatttgggcaaagtacttcaatcaaatcttaacagctgtg
cttgaggtactggacgactctgattcatcaacgagggagcttgctttatctttaattgcc
gagatgctaaacaatcagaaagatgccattgaagactctatcgagattgttcttgaaaaa
cttctgcatgtgaccaaagatgtggtggcgaagatttcaaatgaggcaaaccaatgctta
aatgttctgttggtaaaatatgatcctttcagatgtcttgctgttatagtacctctgttg
gtcagtgatgatgagaagatacttgtcgtgtgtatcaactgtttgacaaagcttgttggg
cgcctttcccaagaggaattgattgatcaattgcctacatttttgccagcactgtttgat
tcttttaataaccaaagtccagatgttcgaaagactgttgttttctgcctggtggatatc
tatatcatgcttgggaaagcatttgctccatacttggaagggcttagcagcacccagttg
cgcctggtaactatctacgctaaccggatttcacaagcaaggtctggcaaggcaattgat
tctaaccaatga
DBGET
integrated database retrieval system
