Phragmites australis (common reed): 133924729
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Entry
133924729 CDS
T10575
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
paua Phragmites australis (common reed)
Pathway
paua03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133924729
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133924729
Spliceosome [BR:
paua03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
133924729
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
133924729
NCBI-ProteinID:
XP_062226378
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Position
7:31179119..31183341
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AA seq
485 aa
AA seq
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MASLADSFLADLDELSDNEAYPEEDNAEAAGMDEDGDDDMPDLESLNYDDLDSVSKLQKT
QRYNDIMQKVEDALQKGTDFSNQGSILEEDPEYQLIVDCNALSVDIENEIIIIHNFIRDK
YRLKFPELESLVHHPIDYARVVKKIGNEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKPL
SEENLEKTIGACDRALTLDAAKKKVLDFVESRMGYIAPNLSAIVGSAVASKLMGTAGGLG
ALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYLEQTEVFQSTPPALRTRACRLIAAKS
TLAARIDSIRGDPTGKAGRNLLEEIRKKIEKWQEPPPAKLPKPLPVPDSEPKKKRGGRRL
RKMKERYAQTDMMKLANRMQFGIPEESSLGDGLGEGYGMLGQAGNGKLRVSAGQSKLAAK
VAKKFKEKSYGSSGATSGLTSSLAFTPVQGIELSNPQAQGNLLGGGTQSTYFSETGTFSK
IRRTQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccttgctgattcttttctagctgatcttgatgaactgtcagacaatgaagcc
tatcctgaagaagataatgctgaggcagcgggtatggacgaggatggcgatgatgatatg
cctgacctcgagtctcttaattatgatgatcttgatagtgtctcaaagctgcagaagaca
caacgctataatgacataatgcaaaaagtagaagatgcacttcagaaaggcactgacttc
tccaatcaaggttccatcctggaggaggatccagagtaccagcttattgttgattgcaat
gctttatcagtagatattgagaatgagatcatcataatccataatttcatacgtgacaag
tataggttgaagtttcctgaactggaatctcttgttcatcatccgatcgattatgcccgt
gttgtcaagaagattggaaatgagatggatttaacacttgtagatctggaagggctttta
ccttctgcaattataatggttgtctcagtgacagcatcaactacaagtgggaagcctctt
tctgaggagaatttagaaaaaaccataggagcatgtgacagagcccttactctcgatgct
gcaaagaagaaagtgcttgattttgtagagagcagaatgggttacattgcaccaaacctt
tctgcaattgttggcagtgctgttgcctcgaaactaatgggaactgctggtggtttggga
gcacttgcaaaaatgcctgcttgtaatgttcagctacttggcgcaaagaagaaaaatctt
gctggattttctactgccacatctcagtttcgtgttggttatcttgaacaaactgaagta
tttcagagcacccctccagctctgaggactcgtgcttgcagacttattgctgcaaaatca
actctggcagcaaggattgattcaattagaggtgatccaactggaaaagctgggcggaac
ttgttagaagaaattcgtaagaagatcgagaagtggcaagaaccacctcctgcaaagctt
ccaaagccacttcctgttccggactctgagcctaaaaagaaaagagggggtcgtcggctt
cgaaaaatgaaagaaagatatgcacagacggatatgatgaagcttgcaaacagaatgcag
tttgggattccagaggagagctcattaggtgatggcttgggggaaggttatggcatgctc
ggacaggcaggaaatggcaagctacgtgtctcagctggacaaagcaaacttgctgctaaa
gtggccaaaaaattcaaggagaagagctatggtagcagcggtgcaacttcaggactgacg
tctagtttggcatttacaccagttcagggaatagagttgtcaaatccgcaggcccaagga
aacctgcttggaggtggaactcaaagcacctacttttctgagaccggcacattttcaaag
atcagaaggacccaatag
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