Phragmites australis (common reed): 133924771
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Entry
133924771 CDS
T10575
Name
(RefSeq) protein indeterminate-domain 5, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133924771
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
133924771
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-met
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
133924771
NCBI-ProteinID:
XP_062226452
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Position
7:31773362..31779745
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AA seq
579 aa
AA seq
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MASNSSAAAAAFFGIRDGDQQDQIKPLISPQQQLAAALPGVASGQGAPAAAPPPPKKKRT
LPDPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNLPWKLKQKNPLQVQR
RRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCEKCSKRYAVQSDWKAHSKI
CGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTSLSSLTSQLYGASNAGNMAL
SLSQVGSHLTSTLQDGHHHHPSPELLRLGGVSGGGGIAARLDHLLSPSGSSAFRSPQAPP
PSAFFLNAAAAAGQDFGDDVGNGSHSFLQAKPFHGLMQLPDLQGNGAGGPGTSMPNFFNL
GFFANNGNSSGSSHEHASQGLMNNDQFSGGADGGVGGGGSEASAGGIFGGNFVGGGDHVP
LAGLYNDQASMLPQMSATALLQKAAQMGATSSANGAASMFRGFVGSSPHVRPAAAHMEQS
EANLNDLMNSLTGGGVSAAGMFGGSNGGGGAGMFDPRHLCDMEAHEVKFGQGGGDMTRDF
LGVGGGIVRGMSTPRGSSDMSSLEAEMKSASSFNGGRMP
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggctgcagcggcggcgttcttcggaattagggatggggaccag
caagaccagattaagccgctgatatcaccgcagcagcagctggcagcggcgctgcccggc
gtggcgtccggccaaggcgcgccggcggcggcaccgccaccgcccaagaagaagagaact
ttaccagaccccgacgcggaggtgatcgcactgtcgccgaagacgctgatggcgacgaac
cggtttgtgtgcgaggtgtgcaacaaggggttccagcgcgagcagaacctgcagctgcac
cggcgcgggcacaacctgccgtggaagctgaagcagaagaacccgctgcaggtgcagagg
cgccgcgtctacctctgcccggagccgacgtgcgtgcaccacgacccctcccgcgccctc
ggcgacctcacggggatcaagaagcacttctgccgcaagcacggcgagaagaagtggaag
tgcgaaaagtgctccaagcgctacgcagtgcagtccgactggaaggcgcactcaaagatc
tgcggcacccgcgagtaccgatgcgactgcggcaccctcttctcccggagggacagcttc
atcacccacagggcgttctgcgacgcgctcgcgcaggagagcgcgcggctgccgccgacg
agcctgagcagcctcaccagccaactctatggcgccagcaacgcgggcaacatggcgctg
agcctctcgcaggtgggctcccacctcacctccacactccaggacggccaccaccaccac
ccgtccccggagctcctccgcctcggcggcgtgagcggcggcggcggcatcgccgctcgt
ctcgatcacctcctgtcgccctccggctcgtccgcgttccgctcgccgcaagctcctccg
ccgtcggcgttcttcctcaacgcggcggcagcggcggggcaggacttcggtgacgacgtg
ggcaatgggtcccactcgttcctgcaggccaagccgttccatggactcatgcagctcccc
gacctccaaggcaatggtgcaggggggcccggcacctcgatgccgaatttcttcaacctg
ggcttctttgccaacaatggcaacagctcggggtctagtcacgagcatgcaagccagggc
ctcatgaacaatgaccagttcagcggcggagcagatggaggcgtcggcggcgggggttca
gaggcatcagcgggggggattttcggcggaaacttcgttggtggtggagaccatgttccg
ctggcagggctctacaacgatcaggcgtccatgcttccgcagatgtcggcgaccgctctg
cttcagaaggcggcgcagatgggcgcgacctcgagcgctaacggcgctgcatccatgttc
cgaggcttcgtgggctcttcgccgcatgtgcggccggcggcggcgcacatggaacagagc
gaggcgaacctgaacgacctgatgaactcgctcactggaggtggcgttagtgccgcagga
atgttcggtggcagcaacggcggtggcggcgcggggatgtttgatccgaggcacctgtgc
gacatggaggcgcacgaggtgaagttcggtcagggaggcggcgacatgacgcgggatttc
ctcggcgtggggggcggcatcgtgcgcgggatgtcgactccgagaggaagcagcgacatg
agctccttggaggccgagatgaagtcggcctcgtcgttcaacggaggcaggatgccatga
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