Phragmites australis (common reed): 133924882
Help
Entry
133924882 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133924882 isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133924882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133924882
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
133924882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Zn_ribbon_RanBP
PBP1_TM
Motif
Other DBs
NCBI-GeneID:
133924882
NCBI-ProteinID:
XP_062226598
LinkDB
All DBs
Position
7:complement(33587666..33595678)
Genome browser
AA seq
675 aa
AA seq
DB search
MPRKVVSGPDYDDGYDDYDEYDEDYDDYDETGYGKNQHPVKEEKESLKKSSSTVPVHWMC
SMCTFNNHESMMYCEMCGVFRESFVKSAKDGSIKDAVSAVSSDLRTSAASKIDSAKMSMK
TRAIDIDGDSKGKHASASCDKAANSIQLSPAVSSLGAKKEKTAPVLSDEVPVERIDFKLK
GDQRKGAGSSSQNYDVAQKLSSDISQLSLEKNNVNVTKPCLPEEYKPEKWMLAHQESGVL
SQLNLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKESKEKGKGSFAFAWAMDESSE
ERERGVTMTVAVAYLETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVVDASTGSFEA
GMDGEGGKSVGQTKEHAQLVRSFGVEQLVVAVNKMDAVGYSKERFDFIKLQLGSFLRSCN
FRDSAITWIPLSAVENQNLIKRPSDARLTSWYQDFCLLDAIDSLQLPSRDVSKPLILPIC
DVIKSQSTGQLAAFGKLETGAIRNGSKVLVLPCGQEATVKTIERDSNSCSIARAGDNVAV
SLQGIDGSRLIPGGVLCHPGFPVAVANHLELKVLVLDIAIPILVGSQVEFHIHHVKEAAR
ITKIIALLDKTGKPSKSAPRFLKSKQNAVVQVALDGAVCVQEFSKSRALGRAYLRSSGRT
IAVGVINRIIGQDQS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgcaaagttgtctctggacctgactatgatgatgggtacgatgactatgatgag
tatgacgaggactatgatgattatgatgagaccggatatggcaagaatcaacatcctgta
aaggaggagaaagaatcattgaagaagtcctcaagtacagtccccgtgcattggatgtgt
tccatgtgcacattcaataatcatgaaagcatgatgtactgtgagatgtgtggagttttc
cgtgaatcctttgtcaaatctgccaaggatggttcgataaaagatgcagtcagtgcagtg
tcaagtgacctcaggacatctgctgcgtcaaaaattgattctgccaagatgtcaatgaag
actcgcgccatagatattgatggtgattctaagggaaagcatgctagtgcctcctgtgac
aaagcagccaattccatacagttatcacctgctgttagctcattaggtgctaaaaaagag
aagaccgcccctgtactttctgatgaagtgcctgtggagaggatagattttaagctgaag
ggtgaccagcgtaagggggctggtagttcttcacagaattatgatgtggcccagaagctc
tcttctgacataagtcagctaagtttagaaaagaacaatgtaaatgtcacaaaaccttgt
ttgcctgaagagtataagcctgagaaatggatgttagctcatcaggagtcaggggtgctg
agccaactaaaccttgcaatagtgggtcatgttgattctggcaagtcaacactatctggg
agattactacatctattaggaaggatatcgaaaaaagatatgcacaagaatgagaaggag
tctaaagagaaagggaagggatcatttgcttttgcatgggccatggatgagagcagtgaa
gaaagagaacgaggtgtgacaatgactgtggctgtggcttatttggagaccaagaaatac
cgtgttgttttgctcgattcacctggccacaaagattttgtgccaaatatgatatctggt
gcaacacaagccgatgcagctattcttgtggttgatgcttccactggttcttttgaagcc
ggcatggatggtgaaggaggaaaaagtgttggccagactaaagagcatgctcagcttgtt
agaagctttggcgttgaacagcttgttgttgcagtcaacaagatggatgctgttggatac
tcaaaagaaagatttgattttatcaaactacaacttggtagtttcctgcggtcatgcaac
ttcagagactcagctattacctggattcctcttagtgctgtagaaaatcaaaatttgatc
aaacgtccttcagatgcccgtttgacctcctggtatcaagatttctgtctcttggatgct
atagattccctgcagcttccttctcgggatgtttcaaagcccctcattcttccaatctgt
gatgttatcaagtctcagtcaacagggcagttggcagcttttggaaaattggaaactggg
gctattcgaaacggttcgaaggtgttagttttaccttgtgggcaagaggcgacagtgaaa
accatcgagcgggactctaattcatgcagcatagcgagagctggtgacaatgtggcggtt
agtttacagggtattgatgggagtcgactaatacctggtggggttctttgtcaccctggt
ttcccggtggctgtagctaaccacttggagctgaaggttctagtcctagacatcgccatt
cctattcttgttggttctcaggtggagtttcacatacatcatgtgaaggaggccgcaaga
ataacaaaaatcattgcattgcttgacaagactggcaaaccaagtaaatcagcacctcga
tttcttaaatcaaagcagaatgctgttgtacaggttgccctagatggagcggtctgtgtt
caggaattctctaagagccgagctctcgggagggcatacttaaggtcgtctggacgcacg
atcgccgttggcgtaattaatcggataattggccaagatcagagctaa
DBGET
integrated database retrieval system
