KEGG   Phragmites australis (common reed): 133925080
Entry
133925080         CDS       T10575                                 
Name
(RefSeq) UBP1-associated protein 2B-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
paua  Phragmites australis (common reed)
Pathway
paua03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    133925080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133925080
   03041 Spliceosome [BR:paua03041]
    133925080
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     133925080
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133925080
Spliceosome [BR:paua03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    133925080
SSDB
Motif
Pfam: RRM_1 RRM_7 SNAPC2 NMB0537_N
Other DBs
NCBI-GeneID: 133925080
NCBI-ProteinID: XP_062226889
LinkDB
Position
7:complement(35579904..35584889)
AA seq 526 aa
MAPKKRKADPTETAAVADPAAANHRQEPASSEPRPRGTIYFPITDDPPEPTALAEEDEDE
GAGDDEEEVEDIGKLLEPLSREQLVALLRTAAEGSPATMAAVRRVAESDPASRKLFVHGL
GWGAGADDLRSTFSRFGDLEDCRVISDKQSGRSKGYGFVLFRSRRSALRALRRPQLQIGG
RLAFCHLAASGPAPPASQSQNPSSNANTNSNSAATTNASGSSSSQPDNMQRKIFVGNVHA
DVDVDRLYEYFSQFGEIEEGPLGFDKNTGKPKGFALFVYKTAESARRALEEPVRNFDGKM
LNVQKAIDGRTKSVTGTNANANSNTTAASVAAAAAQMTAPASAAISPYDASAYGSTVVPD
LGFAQQAAMLGLGAQQQAFAQPNAMLAMMAAAMQNPAALGMTPAMFAAMNPAFAAAALGA
GGQQVHTAGLAGFGAQGFGTQAFGSGGAAFPNAAGVQGAAAAYQGGPPGFQGPPGFQSSG
FQVGQATTQTGTAVAAAGAAGYQAGAAGQGQVPGAQIGGTGFQGGY
NT seq 1581 nt   +upstreamnt  +downstreamnt
atggcgccgaagaagcgcaaggccgatcccaccgagaccgccgccgtcgcggatcccgcc
gcagccaatcaccggcaggagcccgcatcctccgagcccaggccccgcggcaccatctac
ttccccatcaccgacgacccgccggagcccaccgccctcgccgaggaggacgaggacgag
ggcgccggggacgatgaggaggaggtggaggacatcgggaagctgctcgagccgctgtcg
cgggagcagctcgtggcgctgctccgcacggccgcggaggggagccccgccacgatggcg
gccgtgcggcgcgtggcggagtccgaccccgcgagcaggaagctgttcgtccacggcctc
gggtggggcgccggcgccgacgatctccgctccacgttctcacgcttcggcgatctcgag
gactgccgcgtcatctccgacaagcagtcggggagatcaaagggctacgggtttgtcctt
ttccgctcccgccgctcagcgctccgcgccctccgccgcccccaactccaaatcggaggt
cgtcttgctttctgccacctcgctgcctctggtcctgcgcccccagcatcacagtcccag
aacccaagctccaacgccaacactaattccaactccgctgccaccaccaacgcttctggt
tcctcatcttcacaacccgacaatatgcaacgcaagatatttgttggtaacgtgcacgct
gatgtcgacgttgaccgcctctatgagtatttctcgcaatttggtgagattgaggagggg
ccattgggctttgacaagaacaccggcaaacctaagggatttgcattgtttgtttacaag
actgcggagagtgcccgccgtgcattggaggagccagttaggaattttgatggcaagatg
ctcaatgtgcagaaagctatagatgggaggaccaagagtgtaaccgggacaaacgcaaat
gctaattctaataccacggctgcctctgtggcggctgccgccgcacagatgactgctcct
gccagcgctgctattagcccgtatgatgcatcagcatatggttctactgttgttcctgac
ttggggtttgcgcagcaagctgctatgctggggttaggtgcccaacagcaggcatttgcg
cagcccaatgcaatgcttgccatgatggcagcggcaatgcagaacccagccgcgctgggg
atgacaccagccatgttcgcagctatgaaccctgccttcgctgctgctgcattgggtgct
gggggacagcaggtacacacggctggccttgcgggttttggagctcaaggttttggaacg
caggcgtttggatcaggaggtgctgcttttccgaatgcagcaggtgttcaaggagctgct
gctgcatatcaaggaggtcctcctggttttcaagggccgcctgggttccagagttctggg
tttcaggttggccaagcaactacccagacaggtactgcagtggcggctgccggtgctgct
ggttatcaggctggcgctgctgggcagggccaagtgccaggtgctcagatagggggcact
ggttttcagggtggatattga

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