Phragmites australis (common reed): 133925084
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Entry
133925084 CDS
T10575
Name
(RefSeq) DNA polymerase I A, chloroplastic-like
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03030
DNA replication
paua03410
Base excision repair
paua03420
Nucleotide excision repair
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
133925084
03410 Base excision repair
133925084
03420 Nucleotide excision repair
133925084
03440 Homologous recombination
133925084
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
paua03032
]
133925084
03400 DNA repair and recombination proteins [BR:
paua03400
]
133925084
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
133925084
DNA replication proteins [BR:
paua03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
133925084
DNA repair and recombination proteins [BR:
paua03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
133925084
NER (nucleotide excision repair)
GGR (global genome repair) factors
133925084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
133925084
NCBI-ProteinID:
XP_062226898
LinkDB
All DBs
Position
7:35618278..35627060
Genome browser
AA seq
1034 aa
AA seq
DB search
MAMAGKAPAPAPALLGRCPCSAPPWAPSPFRSRRRGRSMTSPFTEGRRQEYSHSSGLGIQ
DNRALEFGVCVNFNVQSSAQEWAEESKRLSFIKTSNNVMNSICNGSTHLGAGILHHEPLE
DYKSSIHSSLHSVRQRMAPNSLANRHANTELAKHHVINRAAGAVSALTSVVNNDTKPVNR
PNDSEVEVHWPNGSKFHASLPKISEVETSLQFDDKASDGYAKDEHECSPKKTVQPTSART
PLSKESKDARKALGTIYEKILVVDDVKSARSIVQLLTMKYRNFIHACDTEVANIDVKQET
PVGHGEVICFSIYSSTSGAEADFGNGKTCIWVDVLDGGQDVLMEFAPFFEDPSIRKVWHN
YSFDSHVIENYGIKVAGFHADTMHLARLWDSSRRTDGGYSLEGLTNDHRVMGVVPKELQK
IGKRSMKTIFGRKKIKKDGTEGKITSIEPVEILQREDREMWICYSSLDSMSTLRLYESLK
SKLEKKHWTFDGCPRGSMYDFYEEYWRPFGAVLVKMETAGMLVDRTYLSEIEKVAVAQRK
LAADKFRKWASKYCPDAKYMNVNSDTQIRQLFFGGIENRCKPGETLPRSKAIKVPNDDNA
VAEGKKVPKYRTIELFSIVEGLKADIFTASGWPSVSGDALRSLAGKVPSDLVYTTNDLED
NECGSDSEISDYDLEDTSSYGTAYEAFGGGKKGKEACHAIAALCEICSIDSLISNFILPL
QGNHISCKEGRIHCSLNINTETGRLSARTPNLQNQPALEKDRYKIRQAFVAAPGKTLIVA
DYGQLELRILAHLADCKSMLDAFKAGGDFHSRTAMNMYQHIREAVEEKKVLLEWHPQPGQ
EKPPVPLLKDAFGAERRKAKMLNFSIAYGKTAHGLARDWKVSVKEAKDTLKLWYSDRKEV
LAWQMEQKELAQEKCEVYTLLGRSRRFPNMAYATSGQRGHIERAAINAPVQGSAADVAMC
AMLEIDRNTRLKELGWTLLLQVHDEVILEGPAESADLAKAIVVECMSKPFYGTNILNVDL
AVDAKCAHNWYAAK
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggcggggaaagcgcccgcaccagcgcccgcgctgctcgggcggtgcccgtgc
tcggcgcctccgtgggcgccgtcgcccttccgctcccgccgccgcggccgctcgatgacg
tcgccgttcaccgagggcagaaggcaggagtactctcatagttcgggccttggaattcaa
gacaacagagctcttgagtttggagtatgtgtcaacttcaatgtgcaaagtagcgcgcaa
gaatgggctgaggagagcaagaggttatcttttatcaaaaccagcaataatgtcatgaat
agtatttgtaacggttccactcatctaggggcgggtattcttcatcacgagcccttggaa
gattacaagagctccatccattcttcattgcacagtgtgagacaaagaatggcacctaat
tctcttgcaaataggcatgccaatacagagttggcaaagcatcatgtgatcaatcgtgct
gcaggtgctgtttcagcactgactagtgttgtcaataatgacactaaacctgtgaacagg
cctaatgactctgaagtggaggttcattggcctaatggttctaagtttcatgcttctctt
ccgaaaatttctgaagttgaaacaagcttgcagtttgatgacaaggctagtgatggctat
gctaaagatgagcatgaatgctcacccaagaagacagtgcaacctacttcagctagaacg
cccttgtccaaggagtctaaagatgcgcggaaggcacttggtaccatctatgaaaaaatt
ctggtggttgacgatgtcaagtcagccaggagcattgttcaattgcttactatgaagtac
agaaactttattcatgcatgtgacacagaggtagctaatattgatgttaaacaagagaca
ccagttggccatggagaggtaatatgctttagcatctactctagcacttctggtgctgaa
gctgattttggaaatggcaagacatgtatttgggtggatgtgctggatggtggacaggat
gtcctcatggagtttgccccattttttgaagatccgtcaatcaggaaggtttggcacaac
tatagttttgatagccatgtcatagagaactatggaattaaagttgctggatttcatgct
gatacgatgcatcttgcacgactttgggattcttcaagaagaacggatggaggatattct
cttgaggggcttacaaatgatcacagggtcatgggtgttgtcccaaaggaattgcaaaag
attggaaagagatcaatgaaaaccatctttggtaggaaaaagataaaaaaggatggaaca
gaagggaaaattacttcaattgagcctgtggaaattttacaaagagaagacagagaaatg
tggatctgctattcttcattagattcaatgagtaccttgaggctttacgaaagcttgaaa
agcaagcttgaaaagaagcactggacttttgatggttgccccagaggttcaatgtacgat
ttctacgaggagtattggcgtccttttggtgctgttcttgtgaaaatggaaacagctgga
atgcttgtcgaccgtacttacctttcagagattgaaaaggttgctgttgcacagcgcaaa
ttagctgcagataaatttcggaaatgggcatctaaatattgccctgatgcaaaatacatg
aatgtcaatagtgatactcagattcgccaactcttctttggtggtatagaaaatagatgc
aaacctggtgaaactttgccgaggagtaaagctattaaagtgcctaatgatgataatgca
gttgctgagggcaagaaggttccaaagtatcgcacaattgaactattcagcattgtggaa
ggcctgaaagctgatatattcactgcaagtggctggccttcagttagtggggatgcattg
agaagtttggctgggaaagttccatcggatcttgtttacacgacaaatgatttagaggat
aatgaatgtggtagcgattctgaaatttctgattatgatctagaagacacctcctcttat
ggaactgcatatgaagcatttggaggaggaaagaaaggaaaggaagcatgccatgccatt
gcagctctgtgcgagatctgttctattgactcgctgatatccaacttcattcttccttta
cagggaaatcatatatcatgtaaggaggggcggatccactgttccttaaatatcaataca
gaaacagggcgtttatcggctaggacgccaaatttacagaaccaacctgcacttgaaaag
gaccggtataaaatccgccaagcttttgttgcagctccagggaagactcttattgttgcc
gattatggtcagctggagctcaggatcttggcacaccttgctgattgtaaaagcatgtta
gatgctttcaaagctggtggtgacttccattccaggacagccatgaacatgtaccagcat
attcgtgaggctgttgaagaaaagaaagtacttcttgagtggcatcctcaacctggtcaa
gagaaacctcccgtgccgttgttgaaggatgcttttggtgccgagaggaggaaagctaaa
atgctaaatttttccattgcatatggcaaaacagcacatgggcttgctcgggattggaag
gtttctgttaaggaagcaaaggatacactgaaactctggtatagcgatagaaaagaggtt
ttggcttggcaaatggagcagaaagaactagctcaggagaagtgtgaagtttatactttg
cttgggcgatcacgccgatttccaaacatggcttatgcaacttctggtcaaaggggtcac
attgagcgtgctgctattaatgctcctgtacagggcagtgcagcagatgttgctatgtgt
gcaatgcttgagatagatcggaatactcgtcttaaggagcttggttggacgctactcttg
caggtccatgatgaagtgatacttgaagggcctgcagagtctgctgatctggccaaggcc
atagtggttgagtgcatgtctaaacccttctatggcaccaacatcctgaacgtcgacctg
gctgttgatgccaaatgtgctcataattggtatgcagccaagtag
DBGET
integrated database retrieval system
