Phragmites australis (common reed): 133925105
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Entry
133925105 CDS
T10575
Name
(RefSeq) ubiquitin C-terminal hydrolase 22-like
KO
K11366
ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133925105
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133925105
04121 Ubiquitin system [BR:
paua04121
]
133925105
03036 Chromosome and associated proteins [BR:
paua03036
]
133925105
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133925105
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133925105
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
133925105
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133925105
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
133925105
SLIK complex
133925105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-UBP
Zn_Ribbon_TF
zf-UBP_var
PhrC_PhrF
ISC10_helical
DUF6604
Motif
Other DBs
NCBI-GeneID:
133925105
NCBI-ProteinID:
XP_062226926
LinkDB
All DBs
Position
7:complement(35977581..35981260)
Genome browser
AA seq
560 aa
AA seq
DB search
MSTPSAPPPCPHLAAHRLSSRPLRFLRRCLRVRPLGRPEICRDPRELPRCSPCAAASPSS
PSRLYACLSCAAVFCPSHAATHASASAPGHQIAVDVDRAELFCAACGDQVYDPDFDQAVF
LAQSFSLLPSTASPSPSPAPRKRRRVDYRAWAPDPAEFVLMSSADPTTSASAVAPVGLRG
LNNLGNTCFMNSVLQALLHAPPLRNYFLGDRHNRFLCPRRTPVRHRATEADAAKVACLAC
DLDEIYSAAFSGERMPYSPAKFLYSWWQHASNLASYEQQDAHEFFISILDHIHENIKDEQ
HKSHAQGHGDCCIAHRVFSGILRSDVTCTSCGFTSTTFEPCMDISLDLDAGYNNSLGVTN
TKSHVRNGERSLAGMNSKVSTLMRCLERFTRAERLDAEQKFLCEHCNERQESLKQMSIRR
LPLVSCFHIKRFEHSSVKKMSRKVDHSLHFPFSLDMAPYLSSSILRSRYGNRIFPSEASD
SDAVSELSSEFEIFAVITHSGKLEAGHYVTYLRLNNHWYRCDDAWVTRVAEHTVRASQAY
MLFYVQKTLYYKACERAAAV
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccgtccgcgccgccgccgtgccctcatctcgccgcgcaccgcctgtcctcg
cgcccgctccgcttcctccgccgctgcctccgcgtccgcccgctcggccgccccgagatc
tgccgcgacccgcgcgagctcccgcgctgctcgccctgcgccgccgcctccccctcgtcg
ccctcccgcctctacgcctgcctctcctgcgccgccgtcttctgcccctcccacgccgcc
acccacgcctccgcctccgcccccggccaccagatcgctgttgacgtcgaccgcgcagag
ctcttctgcgccgcctgcggggatcaggtctacgatcccgatttcgaccaagccgtcttc
ctcgcccaatccttctcgctcctcccctccactgcctccccctccccctccccggcccca
cgcaagcgccgacgcgtggactaccgcgcctgggccccagatccggccgaattcgtgctc
atgagctccgccgaccccaccacctccgcgtccgccgtcgcgccggtggggctgcgcggg
ctcaacaacctcggcaacacctgcttcatgaactccgtgctccaggcgctccttcacgcg
ccgccgctccgcaactacttccttggcgatcggcacaaccgcttcctctgcccgcgacgc
acgcccgtcagacaccgggccacggaggccgacgccgccaaggtcgcgtgcctcgcgtgt
gatctcgatgagatctactccgctgccttctccggagagcgcatgccctacagccccgcc
aagttcctatatagttggtggcagcatgcgtcgaatcttgcaagctacgagcagcaggat
gcacatgaatttttcatctccatccttgaccatatccatgaaaatataaaggatgaacaa
cacaagtcacatgcccaagggcatggggattgctgcatcgcccacagagtgttttctggt
atcttgaggtcagatgtcacctgcacaagctgtgggttcacatccacaacttttgaaccc
tgtatggacatttccttagacttggatgctggatataacaattctcttggtgttacaaac
acaaaatcacatgtgcgcaatggggaacgaagcttggctggcatgaattccaaggtatca
acactcatgagatgtttggagcggtttacaagggctgagaggcttgatgctgagcagaag
ttcttgtgtgaacattgcaatgagaggcaagaatccctgaagcaaatgtccattcggagg
cttccattagtttcttgctttcacatcaagagatttgagcattcatcagttaaaaagatg
tcaaggaaggttgatcattctttgcattttcccttttcccttgacatggcaccataccta
tcatcctctattctcagaagcagatatggcaaccgtatatttccatcagaagctagtgat
tcagatgcagtgtcagaattgtcatcagaatttgaaatattcgcggtgatcacacatagt
ggtaaactagaagctggccattatgtgacatatcttaggttaaacaatcactggtacaga
tgtgatgatgcctgggtaaccagagttgcggagcatactgtcagagcttctcaagcatac
atgctcttctatgtgcagaagacgctttactacaaagcttgtgaaagagcagccgcagtc
tga
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