Phragmites australis (common reed): 133925108
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Entry
133925108 CDS
T10575
Name
(RefSeq) crossover junction endonuclease EME1
KO
K10882
crossover junction endonuclease EME1 [EC:3.1.22.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
paua03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133925108
03460 Fanconi anemia pathway
133925108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
paua03400
]
133925108
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
133925108
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GFIT
Motif
Pfam:
ERCC4
EME1-MUS81_C
SprA-related
DUF740
Motif
Other DBs
NCBI-GeneID:
133925108
NCBI-ProteinID:
XP_062226930
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Position
7:36026780..36034252
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AA seq
625 aa
AA seq
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MASSGVPVVDILDDDDDDVAAVASPPSSRKRSLPVTTSSSPDFLDAFSPSPPLQKRLLLA
ASAIVLDDTPSPPKRRPSSAPEPPVLVVDDDTDPSPAPCSLVPGDYVDETPDSVLPCSAR
FRSDFSETPGSAEPCSIDLDIVVVETPGFTSPRSIGPPAAHGSSSAAPAQKLSGVSSLIS
LDSDDESDDTIHTESLTKLPSNTTGTTSYGQPLYADLPREDSTLPGADVCTETCSPWEVK
KRQKEEEKEKQQEEKRLKKEMKAKLIEERKQKQQEEKRLKKEMKAKLIEERKQNQQENKM
QKEAMKAQLAEEKKKEKEVMKWESGKFALKCITAEIDSSIVESGSVGGQLLSSFAEKDLS
YRVTANSTRGSILWKMKVPDDIAQNQAAVSEEVPYIVIFLQAEEFCDLVSSELLFNHIQK
VRNDYPKFTICYVTNKLMSYINKREQSQYKNQSSFSTWRRPPVEKVLCKLATHYVNVHSR
QCIDEAEVAEHLVGLTANLAKCKFRKPLTWLSVHANGAIIPKGFIDKGLAKKDTWLKALI
AIPGIQPRYALAIWKEYRSMRSLLNVYMDPSKTVLEKELLLSDLKWEDRLGNEGKRLGQK
CSRRVYRILMAQNGELDTDSPEAGA
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctccggggtccccgtcgtcgacatcctcgatgacgacgacgacgacgtcgcc
gcggtcgcatcccctccctcctcccgcaagcgctccctccccgtcaccacctcctcctcc
ccggacttcctcgacgccttctcgccgtcccctcccctccagaagcggctgctgctcgcg
gcatccgccatcgtcctcgacgacaccccatccccgccgaagcggcggccctcgtcggct
cccgaaccgcctgttctcgtggtggacgacgacacggacccctcgcccgccccgtgttcg
ctcgtccccggcgactatgttgatgagactcccgattctgtcctcccatgctccgcccgc
tttcgttctgatttctccgagacgccggggtcggctgaaccctgctctatcgacctcgac
attgttgttgttgagaccccgggcttcacttccccgcgctcgattgggccacctgctgcg
catggctcgtcgtctgctgccccggcgcagaaattgtccggagtttcttctctgatatct
ctggacagtgatgatgagtcggatgacaccatacacacggagtctttgaccaagttgcca
agcaatacaacaggcacaaccagctatggtcaacccctttatgctgatttgcctcgtgaa
gattctactctgcctggtgctgatgtttgtactgagacgtgcagtccttgggaagtgaag
aaacggcagaaggaagaggaaaaggaaaaacaacaggaagagaagagactaaagaaggaa
atgaaagccaaactaattgaagaaagaaagcaaaaacaacaggaagagaagagattaaag
aaggaaatgaaagccaaactgattgaagaaagaaagcaaaatcaacaggaaaataaaatg
cagaaggaagctatgaaagctcaacttgcagaggagaagaagaaggagaaagaagttatg
aagtgggaatcaggaaaatttgctttaaaatgtattacagctgagattgactcaagtatt
gttgagagtggctcagtcggaggtcagcttctttcaagttttgcagaaaaagacctttct
tatcgagttactgctaattcaaccaggggatcgattttgtggaagatgaaagtccccgat
gatattgctcagaatcaagctgcagtctcagaagaagtgccatacattgtaatttttctt
caagctgaggaattctgtgatcttgtaagcagcgaattgctcttcaatcacatccaaaaa
gtccgtaatgactatccgaaattcactatttgctacgtcacgaacaaattgatgagctac
atcaataaacgtgagcaaagtcaatacaagaaccaatcaagctttagtacttggagacgt
ccaccggtggaaaaggttttatgcaaactggcaacacactatgttaatgttcactcaagg
caatgcatagatgaagctgaagtagcagagcatcttgttggcttgacggcgaatcttgca
aaatgcaaatttaggaaaccattgacatggttatctgtgcatgctaacggtgcgattatc
cctaaaggtttcattgataagggtcttgctaagaaggacacctggttaaaagctttaata
gcgattcccggcatccagccgagatatgctcttgcaatctggaaggagtaccgctctatg
agatcccttctgaatgtatacatggatcccagtaaaactgttcttgagaaggaacttttg
cttagcgacttgaagtgggaagatcgcctgggtaatgaaggcaaaaggttgggacaaaaa
tgttctaggagagtctacagaatcctcatggcacaaaatggagagttggacacagattct
cccgaagctggtgcttag
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