Phragmites australis (common reed): 133925329
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Entry
133925329 CDS
T10575
Name
(RefSeq) DDB1- and CUL4-associated factor homolog 1-like isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
paua Phragmites australis (common reed)
Brite
Enzymes [BR:
paua01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
133925329
Protein kinases [BR:
paua01001
]
Serine/threonine kinases: Other
Other
133925329
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
133925329
BRITE hierarchy
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133925329
NCBI-ProteinID:
XP_062227244
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Position
7:complement(38545051..38554275)
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AA seq
1905 aa
AA seq
DB search
MAATEPGSAPPHEDDEALLARVHSVISRVLHRDQDPNPRLLHTLATICELHEARYLQLCA
TNPMLNNTNTRGTYTIGKLANLLRDNDDFYELVFCKFLSDKSYSVAVRAAAARLLLSCHS
AWMPQYPHAFEDSIIENIKSWVTEDAGASNECEWKYLRRNKPTDAEMLRTYAIGLLAMAL
CSGGQLVEDVLTVGVSAKLMHFLRIRVLVDASSSQKDSNHPLDTKHPRGRDDGRGKSRLA
QDGARLDGTKVGYGMLTDPTVEKDNEPCVGMRQAHGEKGVDDTISHADASFDNFDIPEAD
RTNDRSYSSSIYDTKSKYGERPSVMRLVKDEDISENGELLKRKLSRAPARLRVKGKAGES
LPECEVTPLSPTSGLRIGGQATRHRNVVMVGDQKKATDANSSSAGLESFSAISREEYEDR
FRDCIIGLNDISGIVLKAVRAAEAEARSANAPDEALKAAGDAAAELVKSAALEVWKSENN
GDAAVLAADKAAATVVEAAMSTSVSRYRSSNQVSEECAVEEAVQTSEDQELEDFVISDHE
QLLQVREKYSIQCLQVLGEYVEALGPVLHEKGVDVCLSLLQRSIKDQEGCGHFALLPDVL
KLICALAAHRKFAALFVDRGGIQKILSVPRITQTYTGLSACLFTFGSLQSTMERVCALSS
YTLDNVVELALQLLECPQDLARKSAAIFFAAAFVFKAVLDLFDARDGMQKLLDILYGCAS
VRSGGNSGGLGSSNVSQGNDRSPAEGLTASEKQVAYHTCVALRQYFRAHLLQLVDSIRPG
KSIRSIARNTSSARAGYKPFDISNEAMDAVFRQIQRDRKLGPAFVKARWPALDKFLASSG
HITMLELCKFQAHGDRYLRDLTQYAIGVLHIVTLMPYSRKWIVHATLSNNRVGMAVLLDA
VKSFDYIDHEVICPALNVLVNLVCPPPAISNKPSSTANQQPTATQAFVGTSESRDRNFEK
STSDRNLIGNQGESRDRSGDGNPVERTNTSHQGNTTQISTPVVPSGVVGDRRISLGVGAG
GPGLAAQLEQAYRQAREVVRANNGIKILLQLLSSRMVTHPVAIDSIRALACRVLLGLARD
DAIAHILTKLQVGKKLSELIRDTSAQTSGGDSGRWQTELTQVAIELIGVLTNSGKETTLA
ATDAAAPALRRIERAGIAAATPISYHSRELMQLIHEHLLGSGFTATAAMLQKEAGLAPLP
LIAAVLPVHQVPALEASSVQQQWPSGRVQGFLPHKTNITTDQAGQRSDSVLPSSKKKALT
FSSSFSQRTQSPHPLSGNRASNTPKSPVPIVADAGDAEILHKTPLSLPLKRKLVDMKDLN
SASVAKRPATTDQSCQSSVFQTPAPTRRGLSVVVDSPTAFHSGRTNFNNISAENLDNSQG
TPGVVATTAYPGVNDQQSGNLEPMTLDSMVVQYLKHQHRQCPAPITTLPPLSLLHPHVCP
ELSRSLSAPANIAARMGSREISRQFSGIQVPRRDRHFIYSRFKQCRVCRDEASLLTCMTF
LGDASRVAAGNHNGELRIFDCNTANLLDTQTCHQLRVTMMESTYSGGNELILTSSLNEVK
IWDASSISGGPLHTFEGCKAARFSHSGTLFAALSTDATQREVQLYDVQTYNLDLRLPDNS
SNSGSGRGYIQPIIHFSPSDTMLLWNGVLWDRRSPNPVHQFDQFTDYCGGGFHPAGNEVI
LNSEVWDLRKFKLLRSVPSLDQTVIKFNGTGDVIYAILRRNRDDLQSSINARRVRHPLFP
AFRTIDAVTYSDIATVQLDRCVLDLATEPNDSLIGVVAMDDHEEMFSSARLFEVGRKRIT
DDDSDPEDAGDTEDEDDDNDDSDDDMMLAPVLEGETDSDDLSNSSNDGDNDEIASSDEND
DDPEFIDEGDLEGGGLLEIMGDGEGDGDESDMMGSFSSEDEGWIM
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atggctgccacagaacctgggtccgcccccccgcacgaggacgacgaggcgctgctcgcc
cgcgtccacagcgtcatctccagggtcctccaccgcgaccaagaccccaatccccgcctc
ctccacaccctcgccaccatctgcgagctccacgaggccaggtatcttcagttatgtgca
actaacccaatgcttaataacacaaacacaaggggcacctatacgataggaaagctggca
aatttgctccgggataatgacgatttttatgagttagtgttttgtaagttcttgtcggat
aaatcctactctgttgccgtacgtgctgctgctgctaggcttctcctaagctgccattct
gcctggatgcctcagtatcctcatgctttcgaagattctatcatagagaatatcaaaagc
tgggtaactgaagatgctggtgcatctaacgagtgtgaatggaagtatttacgaaggaat
aaacccacagatgctgagatgctgagaacttatgccatcgggttgcttgctatggcgttg
tgtagcggtgggcagttggtagaagatgtcttgactgtgggggtatcagcgaagctcatg
cactttttgcgtataagagttcttgtggatgcctcatcctcacagaaagattctaatcat
ccactagacaccaagcatcctcggggcagagatgatggtaggggcaaatcacgcctggct
caagacggtgctcgattggatggaacaaaggttggatatggaatgttaactgaccctact
gtggaaaaggacaatgaaccttgtgttggaatgaggcaagcacatggagaaaagggggtg
gatgacactatctctcatgccgatgcatcgttcgataatttcgatattcctgaggctgat
aggaccaatgatcgatcttatagctcaagtatttacgacacaaagtcaaaatatggggaa
aggccttctgtgatgaggcttgttaaagatgaagatatcagcgaaaacggtgaactgttg
aagagaaagttgagtcgagctcctgctcgacttagagtgaagggaaaggcaggtgaaagc
ttgcctgaatgtgaagtaacacctttatcgccaacatcaggattgagaataggaggccag
gctaccagacataggaatgtggtgatggttggagaccaaaagaaggcaactgatgcgaac
agtagctctgcaggtctcgagtcgtttagcgctatttccagagaagaatacgaagaccgg
ttcagggattgcatcattggcttaaatgatatatctggcattgttttgaaggcagtaaga
gctgctgaagctgaggccagatctgcaaatgcaccggatgaagctttgaaagcagcaggc
gatgctgctgccgagcttgtgaaatctgctgctttggaggtttggaaaagtgaaaataat
ggtgacgcggctgtgttagctgccgataaagctgcagctactgtagtagaggctgcaatg
tcaactagcgtctcgcgttacagaagctcaaaccaagttagtgaagagtgtgcagtggaa
gaagctgtgcaaaccagcgaagaccaggagttggaagattttgttatcagtgaccatgag
cagctcttgcaagttagagaaaaatatagcattcagtgcttacaggttttgggagagtac
gttgaagctttgggtcctgttctccatgaaaagggtgttgatgtttgcctttcattattg
caaaggagcataaaagaccaggagggatgtggccactttgcgctacttcctgatgtcctt
aaattaatttgtgcactggccgcccaccgaaaatttgctgcactctttgttgatcgtggt
ggtattcagaagatactatcagttcctagaattactcagacatatactggtctttctgca
tgcttatttactttcgggtctcttcagtctaccatggaacgtgtttgcgcgctctcatct
tacacacttgacaatgttgttgaactagcacttcaacttcttgagtgcccacaagactta
gctagaaaaagtgcagccattttcttcgctgctgcttttgtgttcaaagctgttctggat
ctatttgatgcacgggatgggatgcaaaagcttcttgatatcctatatggctgtgcgtct
gtaaggtctggtggtaactctggaggattaggatcctccaatgtaagtcaagggaatgac
cgatcacctgctgaaggtctgactgcatcagaaaagcaggttgcataccatacgtgtgtt
gcactacggcagtattttagagcccatctccttcagcttgttgattccattcgaccaggc
aaaagcatccgcagtattgctcggaacacgtctagtgcaagagctggttacaaacctttt
gacattagcaatgaggctatggatgctgtttttcgtcaaatccagcgagacagaaagtta
ggccctgcttttgtgaaggctcgttggcctgcgttggacaaatttttggcctctagtggt
catataactatgctagagttgtgtaagtttcaggcacatggtgatcgctatttgcgtgac
ttaactcaatatgcaatcggagttcttcacattgtaacacttatgccgtacagccgcaaa
tggatagtgcatgcaacattaagcaacaatcgtgttggtatggctgtcctattagatgcg
gtgaaaagttttgactatattgatcatgaggtgatctgtcctgcattgaatgttctcgtc
aatcttgtatgccccccgcctgctatcagcaacaagccatcctcaactgccaatcagcaa
cctacagccacacaagcgtttgttgggacttcagaaagcagagacaggaactttgaaaaa
agtacttcagataggaatttaatagggaatcagggtgaatctcgggatcgatctggtgat
ggcaaccctgtggaaaggactaatacatcacatcaaggaaatactacgcagattagcaca
cctgttgtgccatccggagtagtcggtgatcggagaatatcattaggagttggagctggg
ggtcctggtcttgctgctcagttggaacaagcttatcgtcaagctcgagaagtagtaaga
gccaataatggcataaaaattcttttacagcttctcagttctcggatggttacacatcct
gtggctattgattctattcgagcccttgcctgccgcgtcctgcttgggctggccagagac
gatgcgatcgcacatatactgacaaagctccaggtggggaagaaattatctgaactgatc
cgcgataccagtgcccagacatctggaggtgatagtggaagatggcaaactgagctgacc
caagtggcaattgaactgattggggttctgacaaattctggaaaagaaacaacattagca
gcaactgatgctgctgctccagcattgaggcgcattgagcgagctggaatagctgctgct
actcctatctcctatcattctagggaactgatgcagctgatacatgaacatctccttggg
tccggtttcactgccactgctgccatgctgcagaaggaggctggccttgcacctttgcca
ttgatagctgcggtgcttcctgtccaccaggttcctgccctggaagcatcatctgttcag
caacagtggccttctggtcgcgtccagggatttctcccacataaaacaaatataaccaca
gatcaggctggccagagatctgattctgtcctgccttcctctaagaagaaggcactgacc
ttctcatccagtttctcacaaagaacacaatctccacaccccttgtctggtaatagagca
agcaacaccccaaaaagtcctgtacctattgttgccgatgctggagatgctgaaatattg
cataaaacaccactgtcattgccactcaagaggaagctggtggatatgaaggatcttaat
tctgcatcagtagcaaagcggcctgcaacaacagatcaatcatgccaatcttctgtattc
caaactcctgctcctactcgcaggggtctgtcggtagtagtggattctcctactgcattt
cactctggtcggacaaacttcaacaacatttctgctgaaaacttggacaattctcaaggc
acaccaggagtggtagcaaccacagcttatccaggtgtgaatgatcaacaatcaggaaat
ttggagcctatgacactcgactcaatggttgtacaatacttgaaacaccaacaccgccag
tgccctgctccaattacaactttgccaccactctctctgttgcaccctcatgtttgccct
gagcttagtcgcagccttagtgcaccagcaaacatagctgctcgtatgggaagccgtgag
ataagtaggcagtttagtgggatccaagtacctcgtagggatcgtcattttatatacagc
aggttcaagcaatgccgtgtttgccgtgatgaggcgtcacttttgacttgcatgacattt
cttggagatgcatctcgagttgcggctgggaaccacaacggtgaactgagaatatttgac
tgcaacactgcaaatctcttagacacccaaacatgccaccaacttcgtgttacaatgatg
gagtcaacatattctggtggaaatgagctgattctcacgtccagcttaaatgaggttaag
atctgggatgcttcctcgatatctggggggcctttgcacacatttgagggttgcaaagct
gctaggtttagccactccggaactttatttgctgccctttctactgatgcaactcaacgc
gaggttcaattgtacgatgtacagacatataatcttgatttgcggcttcctgataactct
agcaattcaggttcaggccggggttacatacaacccattatacatttcagtccatctgac
acaatgttgttgtggaatggagttctgtgggatagacgaagcccaaatcctgttcatcag
tttgaccagttcacagactattgtggtggtggcttccatccagctggaaatgaggtgatc
ctaaattcggaggtgtgggatctgaggaaatttaagcttctgaggagcgtcccttccctg
gaccagacagtaataaaattcaatggcacgggtgatgttatctatgccatcctcaggcgt
aatcgtgacgacttacaatcatccatcaatgctcgtagggtcagacatcctctttttcct
gcgttccgcacaattgatgctgtgacttactcagatattgcaaccgtccaacttgaccgc
tgtgtcctcgatcttgctactgagcccaatgattctcttattggggttgttgcgatggat
gatcatgaggagatgttctcttctgctcgcttatttgaagttggcaggaagcgaataact
gatgatgactcagatccggaggatgcaggtgatacagaggatgaagatgatgacaatgat
gattccgatgatgatatgatgctggcgcctgtgctggaaggggagacagattctgatgat
ctaagtaacagcagcaatgatggtgacaacgatgaaattgccagttcggacgaaaacgac
gatgatcctgagttcattgacgaaggtgaccttgaaggagggggcttgctggagattatg
ggtgatggtgaaggggatggcgatgagagtgacatgatggggtcctttagcagtgaggac
gaaggttggatcatgtga
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