KEGG   Phragmites australis (common reed): 133925504
Entry
133925504         CDS       T10575                                 
Name
(RefSeq) serine hydroxymethyltransferase 7-like isoform X1
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
paua  Phragmites australis (common reed)
Pathway
paua00260  Glycine, serine and threonine metabolism
paua00460  Cyanoamino acid metabolism
paua00630  Glyoxylate and dicarboxylate metabolism
paua00670  One carbon pool by folate
paua01100  Metabolic pathways
paua01110  Biosynthesis of secondary metabolites
paua01200  Carbon metabolism
paua01230  Biosynthesis of amino acids
paua01240  Biosynthesis of cofactors
paua04981  Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:paua00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    133925504
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    133925504
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    133925504
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    133925504
 09150 Organismal Systems
  09154 Digestive system
   04981 Folate transport and metabolism
    133925504
Enzymes [BR:paua01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     133925504
SSDB
Motif
Pfam: SHMT Beta_elim_lyase
Other DBs
NCBI-GeneID: 133925504
NCBI-ProteinID: XP_062227396
LinkDB
Position
1:50780249..50788656
AA seq 537 aa
MDLSRPESSDLSLGLHSHGFSHAHARVHAVAAPLPLFDETSSCSSSSAALRPAKRQATGE
FGGADLEARRAAVRSWGNQSLAEADADVHALMERELDRQVRGIELIASENFVCRAVLDAL
GSHLTNKYSEGLPGARYYGGNQHIDAIERLCHERALAAFGLDPARWGVNVQPYSCTSANF
AVYTGLLQPKDRIMGLEPPSGGHVSHGYYTPSGKKVSGASIFFESLSYKVNPQTGYIDYD
KLEERAMDFHPKILICGGSSYPREWDFVRMRLIADKCGAVLMCDMAHISGLVAAKECRSP
FYNCDVVTSTTHKNLRGPRGGIIFFRKGKNLRRRAGSLSQGDENDYDFEDRINFAVFPSM
QGGPHNNHIAALAITLKQVATPEYKAYIQQVKKNAQALASALLRRKCRLVTGGTDNHLVL
WDLRTLGLTGKIFEKVCEACHISINKIPIYGDNGSISPGGVRIGTPAMTTRGCLEDDFEV
IADFLIRATQIASNALKEHGKLQKEFRRGLQNNKDIIELGNQVEAFASQFAMPGFDA
NT seq 1614 nt   +upstreamnt  +downstreamnt
atggatctctcgcggcccgaatcctcggacctgtcgctcggcctccactctcacggtttc
tcgcacgcccacgcccgcgtgcacgcggtcgccgcgcctctgccgctgttcgatgagacg
tcctcctgctcgtcctcgtccgcagcgctccgccccgcgaagcggcaggcgacgggtgag
ttcggcggcgcggatctggaggcccgccgcgccgcggtccgctcctggggcaatcagtcg
ctggcggaggccgacgcggacgtgcacgcgctgatggagcgcgagctggaccgccaggtg
cggggtatcgagctcatagcgtcggagaatttcgtctgccgcgcggtgctcgacgcgctc
ggcagccacctcaccaataagtactccgaggggctcccgggtgctcgctactacggcggg
aaccagcacatcgacgccatcgagcggctctgccacgagcgcgccctcgctgccttcggt
ctcgaccccgcccgctggggcgtcaacgtccagccgtactcctgcacatccgccaatttt
gctgtctacacagggctccttcaacccaaagaccgcatcatggggctggagccgccgtcc
ggtggtcatgttagccacgggtactatacgccgagtggtaagaaggtgtcaggcgcctct
attttcttcgagagcttgtcatacaaggtgaatccacagactgggtatattgattatgac
aagcttgaggagcgcgcgatggatttccaccccaaaattctcatctgtggtggaagctcg
taccccagggagtgggacttcgttcgaatgaggttgattgctgataaatgcggtgcagtg
cttatgtgcgacatggcacatatcagtgggcttgtcgcagcaaaggaatgtcgtagtccc
ttctacaactgtgatgttgttacgtcaactactcataagaatctaaggggtcctagaggt
ggtataatatttttcaggaaagggaaaaatttaaggagacgagctggatctctctctcaa
ggggatgaaaatgattacgactttgaggataggataaattttgctgttttcccttcaatg
caaggagggccccataataatcatattgctgccttggcaataactctgaagcaggtagca
actcctgaatataaagcgtacattcaacaagtcaagaaaaatgctcaggctttggcatca
gccttgctcagaagaaaatgcagattggttactggtggcacagataatcacttggtactt
tgggacctcagaactcttggcttgacaggcaagatcttcgaaaaggtctgtgaggcatgc
cacatatctatcaacaaaataccaatttacggagataatggctcaatatcccctgggggt
gtccggattggaacacctgcaatgactaccagaggttgcttggaggatgactttgaggtg
atcgcagacttcctcatcagggcgacacagattgctagcaatgctctgaaagaacatggg
aagctgcaaaaggaattccgaagaggcctacagaacaataaggatattatagaactcggt
aatcaggttgaggcatttgcatcacagtttgcgatgccaggttttgatgcttga

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