Phragmites australis (common reed): 133925938
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Entry
133925938 CDS
T10575
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00040
Pentose and glucuronate interconversions
paua01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
133925938
Enzymes [BR:
paua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
133925938
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Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
133925938
NCBI-ProteinID:
XP_062227662
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Position
8:28920939..28922828
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AA seq
448 aa
AA seq
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MEEGFQWSRPGSFVLFAVFFLSAAAVSEANIGEFDEHWQKRKLMADAAAQATYKPDPIEE
TNRINRAVHRSTAKEESSTRREMLGKKKKFRGACKATNPIDRCWRCRKDWATDRKRLARC
AQGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWAVIQKEPLWITFAKTMIITLKEE
LIIGSDKTIDGRGAQVRIANGAQLTVQFANNVIIHNIHINDIVSSNKNGGYIRDSPDHFG
WRTVSDGDGITVFGSTNVWLDHISLSNCQDGLIDVIAKSTGVTISNCHMTNHNDVMLFGS
SDSRPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKSPTIIS
QGNRYIAPPNLAAKQVTKQHDAPESEWKNWVWHSQDDLFMDGAYFTVTGGDINRQFNKKD
LIKPKPGSYVTRLARFAGSIPCRPGKPC
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggatttcaatggagcaggccgggctccttcgtcctgttcgccgtcttcttc
ctgtcggcggcggccgtgtcggaggccaacatcggcgagttcgacgagcactggcagaaa
cgcaagctcatggcagacgccgccgcgcaggccacctacaagcccgacccgatcgaggaa
accaaccgcatcaaccgcgccgtccacagatcgaccgcgaaggaggagagcagtacgagg
cgggagatgctggggaagaagaagaagttcaggggggcgtgcaaggcgacgaacccgatc
gaccggtgctggcggtgccgcaaggactgggcgacggaccggaagcggctggcgcggtgc
gcgcaggggttcgggcggaacaccaccggcgggctggccggcaagttctacgtggtgacg
gacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtgggccgtgatc
cagaaggagccgctgtggatcaccttcgctaagactatgatcataacgctcaaggaggag
ctcatcatcggcagcgacaagaccatcgacggccgcggcgcgcaggtgcgcatcgccaac
ggcgcgcagctgacggtgcagttcgccaacaacgtcatcatccacaacatccacatcaat
gacatcgtctcctccaacaagaacggtggctatatccgggactcgccggaccacttcggt
tggcgcacagtatccgacggagacggcatcaccgtcttcggatccaccaacgtgtggctg
gaccacatctccctctccaactgccaggacggcctcatcgacgtcatcgccaagtccacc
ggcgtcaccatctccaactgccacatgaccaaccacaacgacgtcatgctcttcggctcc
agcgacagcaggcccgaagaccagatcatgcagatcaccgtcgccttcaaccacttcggc
agaggactcgtgcagagaatgccaagatgccggtggggattcttccacgtggtgaacaac
gactacacccactggctcatgtacgccatcggcggcagcaagagcccgaccatcatcagc
cagggcaaccggtacatcgccccgccgaacctcgcggcgaagcaggtcaccaagcagcat
gacgcgccggagtcggagtggaagaactgggtgtggcactcgcaggacgacctcttcatg
gatggcgcctacttcaccgttaccggcggcgacatcaacagacagttcaacaagaaggac
ctcatcaagcccaagcccgggtcctacgtcaccaggctcgcgcgcttcgccggctccatc
ccctgcaggcccggcaagccctgctag
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