KEGG   Phragmites australis (common reed): 133925938
Entry
133925938         CDS       T10575                                 
Name
(RefSeq) pectate lyase-like
  KO
K01728  pectate lyase [EC:4.2.2.2]
Organism
paua  Phragmites australis (common reed)
Pathway
paua00040  Pentose and glucuronate interconversions
paua01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:paua00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    133925938
Enzymes [BR:paua01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.2  Acting on polysaccharides
    4.2.2.2  pectate lyase
     133925938
SSDB
Motif
Pfam: Pectate_lyase_4 Pec_lyase_N Beta_helix
Other DBs
NCBI-GeneID: 133925938
NCBI-ProteinID: XP_062227662
LinkDB
Position
8:28920939..28922828
AA seq 448 aa
MEEGFQWSRPGSFVLFAVFFLSAAAVSEANIGEFDEHWQKRKLMADAAAQATYKPDPIEE
TNRINRAVHRSTAKEESSTRREMLGKKKKFRGACKATNPIDRCWRCRKDWATDRKRLARC
AQGFGRNTTGGLAGKFYVVTDGTDDDVVNPRPGTLRWAVIQKEPLWITFAKTMIITLKEE
LIIGSDKTIDGRGAQVRIANGAQLTVQFANNVIIHNIHINDIVSSNKNGGYIRDSPDHFG
WRTVSDGDGITVFGSTNVWLDHISLSNCQDGLIDVIAKSTGVTISNCHMTNHNDVMLFGS
SDSRPEDQIMQITVAFNHFGRGLVQRMPRCRWGFFHVVNNDYTHWLMYAIGGSKSPTIIS
QGNRYIAPPNLAAKQVTKQHDAPESEWKNWVWHSQDDLFMDGAYFTVTGGDINRQFNKKD
LIKPKPGSYVTRLARFAGSIPCRPGKPC
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggaggagggatttcaatggagcaggccgggctccttcgtcctgttcgccgtcttcttc
ctgtcggcggcggccgtgtcggaggccaacatcggcgagttcgacgagcactggcagaaa
cgcaagctcatggcagacgccgccgcgcaggccacctacaagcccgacccgatcgaggaa
accaaccgcatcaaccgcgccgtccacagatcgaccgcgaaggaggagagcagtacgagg
cgggagatgctggggaagaagaagaagttcaggggggcgtgcaaggcgacgaacccgatc
gaccggtgctggcggtgccgcaaggactgggcgacggaccggaagcggctggcgcggtgc
gcgcaggggttcgggcggaacaccaccggcgggctggccggcaagttctacgtggtgacg
gacggcaccgacgacgacgtggtgaacccgcgccccggcacgctccggtgggccgtgatc
cagaaggagccgctgtggatcaccttcgctaagactatgatcataacgctcaaggaggag
ctcatcatcggcagcgacaagaccatcgacggccgcggcgcgcaggtgcgcatcgccaac
ggcgcgcagctgacggtgcagttcgccaacaacgtcatcatccacaacatccacatcaat
gacatcgtctcctccaacaagaacggtggctatatccgggactcgccggaccacttcggt
tggcgcacagtatccgacggagacggcatcaccgtcttcggatccaccaacgtgtggctg
gaccacatctccctctccaactgccaggacggcctcatcgacgtcatcgccaagtccacc
ggcgtcaccatctccaactgccacatgaccaaccacaacgacgtcatgctcttcggctcc
agcgacagcaggcccgaagaccagatcatgcagatcaccgtcgccttcaaccacttcggc
agaggactcgtgcagagaatgccaagatgccggtggggattcttccacgtggtgaacaac
gactacacccactggctcatgtacgccatcggcggcagcaagagcccgaccatcatcagc
cagggcaaccggtacatcgccccgccgaacctcgcggcgaagcaggtcaccaagcagcat
gacgcgccggagtcggagtggaagaactgggtgtggcactcgcaggacgacctcttcatg
gatggcgcctacttcaccgttaccggcggcgacatcaacagacagttcaacaagaaggac
ctcatcaagcccaagcccgggtcctacgtcaccaggctcgcgcgcttcgccggctccatc
ccctgcaggcccggcaagccctgctag

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