Phragmites australis (common reed): 133925942
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Entry
133925942 CDS
T10575
Name
(RefSeq) transcription factor HY5-like
KO
K16241
transcription factor HY5
Organism
paua Phragmites australis (common reed)
Pathway
paua04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
133925942
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133925942
Transcription factors [BR:
paua03000
]
Eukaryotic type
Basic leucine zipper (bZIP)
Plant bZIP factors
133925942
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bZIP_1
bZIP_2
Phlebovirus_NSM
GAS
UPF0242
DUF3450
FlaC_arch
CENP-F_leu_zip
WH_MCM2
DUF3563
bZIP_Maf
GIT_CC
DMPK_coil
TSC22
TPR_MLP1_2
DUF724
Aminopep
CENPH
APG6_N
DUF7365
Sas6_CC
V_ATPase_I
Motif
Other DBs
NCBI-GeneID:
133925942
NCBI-ProteinID:
XP_062227666
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All DBs
Position
8:29797330..29800634
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AA seq
132 aa
AA seq
DB search
MESDEEIRRVPEFGLDQAGPSTSGTSLERAQSSSAAQAASARRRCRSPADKEHRRLKRLL
RNRVSAQQARERKKAYMSELEVRVKDLEKRNSELEQRLSTLQNENQMLRQVLKNTVNRRG
PVVAVPVETANS
NT seq
399 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgatgaggagatcaggagggtgccggagttcggcctggatcaggccggcccg
tcgacgtcaggcacgtcgttggagcgcgcccagtcgtcgtccgcggcacaggccgccagc
gcgcgccgccgctgccgcagcccggccgacaaggagcaccgccgcctcaaaaggttgcta
cgaaaccgggtgtcggctcagcaggcacgggagaggaagaaggcgtacatgagtgagctg
gaggtgagggtgaaggacctggagaagaggaactcggagctggagcagaggctctccacg
ctgcagaacgagaaccaaatgcttagacaggtactgaagaacactgtaaaccgaagaggg
ccagtagtggcagtgccggtggagacagcaaatagctga
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