KEGG   Phragmites australis (common reed): 133925983
Entry
133925983         CDS       T10575                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
paua  Phragmites australis (common reed)
Pathway
paua03083  Polycomb repressive complex
paua04120  Ubiquitin mediated proteolysis
paua04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    133925983
   04120 Ubiquitin mediated proteolysis
    133925983
  09126 Chromosome
   03083 Polycomb repressive complex
    133925983
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133925983
   04121 Ubiquitin system [BR:paua04121]
    133925983
   03036 Chromosome and associated proteins [BR:paua03036]
    133925983
Membrane trafficking [BR:paua04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    133925983
Ubiquitin system [BR:paua04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     133925983
   Cul7 complex
     133925983
Chromosome and associated proteins [BR:paua03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     133925983
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     133925983
SSDB
Motif
Pfam: Skp1 Skp1_POZ RIFIN
Other DBs
NCBI-GeneID: 133925983
NCBI-ProteinID: XP_062227702
LinkDB
Position
8:33658911..33659843
AA seq 181 aa
MASAGESGDGADGKGVTTITIISSDNEAFEVLEAAASMSLTIRHLIEDGCADGGIPLPNV
TAGILAKVLEYCSKHVAAVAASSEAGSSSNAADAAAAPEKEEDLASFDKAFIDVEQDTLY
DLLMAANYLEVKGLLDLACQKVADMIKGKTPDAIRQTFKIKNDFSPEQEEKIREENQWAF
E
NT seq 546 nt   +upstreamnt  +downstreamnt
atggcttcggccggcgagtccggagacggcgccgacgggaagggcgtgacgacgatcacg
atcatcagctcggacaatgaggcgttcgaggtgctggaggcggcggcgagcatgtcgctt
accatccgccacttgatcgaggacggctgcgccgacggcggcatcccgctccccaacgtc
accgctggcatcctcgccaaggtcctcgagtactgcagcaagcacgtcgccgccgtcgcc
gcgagctccgaggccggaagctcctccaacgccgccgatgctgccgcagcaccagagaag
gaggaggatctggcaagcttcgacaaggcgttcatcgacgtggagcaggacacgctgtac
gacctcctgatggccgccaactacctcgaggtcaagggcttgctggacctcgcctgccag
aaggtcgccgacatgatcaagggcaagacgccggacgcgatcaggcagacgttcaaaatc
aagaacgacttctcgcccgagcaggaggagaagatccgcgaggagaatcaatgggccttc
gagtag

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