Phragmites australis (common reed): 133926086
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Entry
133926086 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133926086 isoform X1
KO
K18460
exportin-7
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
133926086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133926086
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133926086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IBN_N
Motif
Other DBs
NCBI-GeneID:
133926086
NCBI-ProteinID:
XP_062227819
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All DBs
Position
8:327327..343989
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AA seq
1056 aa
AA seq
DB search
MSSMESLAQLEVLCEKLYNSRDSAERAHAESTLKCFSENSEYISQCQYILDNASTPYALM
LASSSLLKQVSDRSLSLQLRLDIRNYVINYLAARGPKLQNFVIVSLIQLVCRITKFGWFD
DDRFRETVKEASDFLGLASQDHYFIGLKILNNLVMEMNQPNTAMPMTLHRKIASSFKDQF
LLQIFQISLTSLNQLKSEAPDDFRHVPLDLALKCLSFDFVGSPVDESSEEFGTVQLPASW
RPLLQDPSTVQIFFDYYKVNDIRVSKEALECLVRLACVRRSIFVEDPGRTQFLSHLMSGT
KEILLTGQGLADHDNYHEFCRLLGRFKVNYQLSELLNVEFYGEWIGLVAEFTTRSLLSWQ
WASNSVYYLLSLWSRLVTSVPYLKGETPSLLDETVPKITEGFITSRINSVQAILADNSLE
NPLDSVEVLQDQLEFLPYLCRFQYQSSSLYIINIMEPLLQAYTERSRLPAPGDANELSVI
EGQIAWIVHIIAAILKIRQTVGCSQESQELIDAELSARVLQLMSITDMGVHTQRYQEISK
QRLDRAILIFVQNFRRSYVGDQAIHSSKQLYARLSELLGLNDHLVLLNVIVGKIATNLKC
YVECEDLIDHTLSLFLELASGYMTGKLLLKLESVKFIIANHSQENFPFLAEYRCFRSRTT
FYYILGSLVFMEESPVKFRTFMEPLQQVAFNLEATADAAFQTDVAKHAFIGWMRDLRGIA
MATNSRKTYGLLFDWLYPSRMPLLLRAISLWTDEPEVITPLLKFMCEFVLNKAQRLTFDS
SSPNGILLFREVSKIIVAYGSRILLLPNGTDIYGSKYKGIWISLTVLSRALCGNYVNFGV
FELYGDRALADAFDISLKMTLSVPLSDILAFRKLSKAYFGYMEVLFNSHISFVLNLDTNT
FVHIVSSLESGLKGLDTGISTQCASAIDSLAAFYFNHVTAGDAPPSPASVNLVRHIGEFP
NLFAQILKTLFEIILFEDAGNQWSLSRPILSLIMTSEQMFSDLRAHILASQPVDQQQRLS
QCFDKLMTDVNRNLEPKNRDRFTQNLTTFRHDFRLK
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaatggagagcctagcgcagttagaggtgctgtgcgaaaagctttataattct
agagactccgctgagagagcgcatgcagaaagcaccctcaagtgcttctcggagaacagc
gagtacatttcgcagtgccaatacatattggacaatgcctcaactccatatgccctgatg
ttggcgagctcaagcttgttgaagcaagtttccgaccgcagtctttctttgcaactccgc
ctcgatatacggaattatgtcataaactatcttgccgcaagggggcctaaattgcagaac
tttgtcattgtgtccctaattcagctggtttgtcgaattacaaaatttggatggtttgat
gatgacagattcagagagactgtcaaggaagcatcagatttcttaggtcttgcatctcag
gatcattatttcattggattgaagatactaaataatctagtaatggaaatgaaccagccg
aacactgcgatgcctatgacgcttcataggaaaattgcgagctcattcaaggaccagttt
cttctacagatcttccaaatttcactaacctcactaaaccaactgaagagtgaagctccg
gatgactttagacatgttcctcttgaccttgcattgaagtgcttatcatttgactttgtt
ggttctccagtggatgaaagctctgaagaatttggaacagtgcagcttccagcatcttgg
aggcctcttcttcaagatccttccactgtccagatattttttgattactacaaagttaat
gatatacgtgtttcaaaagaggctttggaatgtctggtgagacttgcttgtgtcaggcgc
agtatttttgttgaggaccccggaaggacccagtttctttctcatctgatgtcaggcaca
aaggaaatactccttaccggccaaggtcttgctgatcatgacaattaccatgagttctgc
cgtcttttgggacgtttcaaagtgaattaccagttgtcagagcttctgaatgttgaattt
tatggtgaatggattggtctagtagctgagtttacaactagatccttgctgtcatggcag
tgggccagcaacagtgtctactatctcttaagtctttggtcaaggctggtgacatctgtg
ccttacttgaaaggcgaaacgcctagtctacttgatgaaactgttcccaaaatcacagag
ggttttatcacttctagaattaattctgttcaggccatccttgctgacaactcattggaa
aatcctttggatagtgtggaagttctccaggaccagctggagtttcttccttacctttgc
agattccagtaccaaagcagtagtctgtacatcataaacatcatggaacctcttctgcaa
gcttatacggaaaggtcaagattaccagctcctggagatgcaaatgagctctctgtcatt
gaaggccaaattgcatggatagtccacataattgcagccattctcaaaattaggcagacc
gttggttgtagccaagaatcacaagagttaattgatgcagagctgtctgcccgtgtgcta
cagttgatgagtattactgacatgggggtgcacacacagagatatcaagaaataagtaag
caaaggcttgaccgagctattctcatctttgtgcaaaatttcagaaggtcatatgtaggc
gaccaagccattcattcttcaaagcagttgtatgcaagattgtctgagcttctgggactg
aatgaccatttagttttactcaatgtcattgttggaaaaatagctacgaatcttaagtgc
tatgtcgagtgtgaggatctcatcgatcatactctgtccctgttcctggagcttgcgtct
ggctatatgactggaaagctgcttctcaaactggagagtgtgaagttcatcattgcaaat
cattctcaggagaatttcccatttcttgcagaatacagatgtttccgtagtagaacaacg
ttctattacatacttggctccttagtcttcatggaagagagcccagtaaagttcaggact
ttcatggaaccccttcagcaggttgcatttaatctggaggcaactgctgatgctgctttc
cagactgatgttgctaagcatgcatttattggttggatgagagatctacgaggcattgca
atggccaccaacagccgcaagacctatggcctcctatttgactggttgtatccatctcgc
atgccacttttattgagagccatctcactatggactgatgaaccagaggtcatcacaccc
ttgctcaagttcatgtgtgaatttgttctgaacaaagctcaaagattaacatttgactca
tcatcgccaaatgggatccttttgttccgagaggttagcaagataattgtggcttacggg
tcgcggattctattgcttccaaatggcacggatatttatggaagtaaatacaaaggcata
tggatctcactgactgttctttcaagggctttgtgtgggaactatgtcaattttggtgta
tttgagctttatggtgatagagcacttgcggatgcctttgatatatctctaaagatgacc
ctctcggttccattatctgatatattggcattcagaaagctgtcgaaagcatactttgga
tatatggaagttctattcaacagccatatcagttttgttctcaatttggacacaaacaca
ttcgtgcatattgtcagctcacttgaatctggcttaaaaggtttagatacagggatatca
acacagtgcgcttctgccattgatagcttagcagccttttactttaaccacgttacagct
ggtgacgcacctccatcaccagcttcagtaaatctcgtgaggcacattggagagttccca
aatttgtttgctcagatactgaagacactttttgagatcattctctttgaggatgctggt
aatcagtggagtctcagtcgaccgatattgagcctgataatgaccagcgaacagatgttt
agtgacctgagagcgcacatattagcatcacagcctgtagaccagcaacaacgcctttcg
caatgttttgataagctgatgaccgatgtcaacaggaatttggaaccaaagaaccgagac
agattcactcaaaatcttacaacattcagacatgatttccgactgaagtaa
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