Phragmites australis (common reed): 133926100
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Entry
133926100 CDS
T10575
Name
(RefSeq) cell division control protein 48 homolog C
KO
K14571
ribosome biogenesis ATPase
Organism
paua Phragmites australis (common reed)
Pathway
paua03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133926100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133926100
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
133926100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_14
AAA_22
Rad17
AAA_33
AAA_2
AAA_16
TIP49
RNA_helicase
AAA_28
AAA_17
nSTAND3
NPHP3_N
AAA_18
ABC_tran
IstB_IS21
Viral_helicase1
Mg_chelatase
NB-ARC
NACHT
TsaE
Cytidylate_kin2
Bac_DnaA
AAA_3
Vps4_C
SKI
NTPase_1
ATPase_2
AAA_11
Parvo_NS1
AAA_7
Nucleolin_bd
Motif
Other DBs
NCBI-GeneID:
133926100
NCBI-ProteinID:
XP_062227844
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All DBs
Position
8:499057..504359
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AA seq
765 aa
AA seq
DB search
MGKRPRHGGAGRSQLASFEWKLRRLILNGGLAVSGSSAEDVANTLRIHHPELRRQKLDPF
TAAVRRALSSLPSPSPSGSDDDDSSTSRRRRHDAHASTSSSTSVSEEAAHPPPSPAFDVT
KSMLRSQYASQTPKRNPGTNQQLEIEVTAEKARRLITSDGGDGGDAKPEAPATAGVVRGE
KGPRFADLGGMEAVIEELMMEVVVPLCHPELPQRLGVRPVAGLLLHGPPGCGKTTLAHAI
ANETGVPFYKISAPEVVSGVSGASEENIRGLFQKAYRTAPSIVFIDEIDAIASKRESLQR
EMERRIVTQLMTCMDEFHQNIGSGGADLDGESSEKKPGYVIVIGATNRPDAVDQALRRPG
RFDREISLGVPDENARKQILKMLTQNLRLEGEFDLFKIARATPGFVGADLKALVDKAGNL
AMKRIIDKRRVQYCREHDGNSKHDWWRKPWEADEVESLHIIMDDFEEATKMVQPSLRREG
FSSVPDVTWDDVGGLDSLRKEFDRCIVRCIKHPEDYEVFGVNMQAGFMLFGPPGCGKTLI
AKAVANEAGANFIHIKGPELLNKYVGESESEVRKIFTRARTNSPCILFFDEIDALTTKRG
KEGGWVVERLLNQLLIELDGADQRQGVYVIGATNRIDVIDDAVLRPGRFGKKHYVPLPCA
DERVSILKAHARNKPISSGVDLDALARRKECNDLTGADLASLVNEAAMAALEERLEFIEN
GTSSMSSSCLIELSHFVRALSKVKPSVSEQQRKYYEVLSKRYSSN
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgcccgcgtcatgggggcgccggccggtcccaattggcgtccttcgagtgg
aaactccgccgcctcattctgaatggcggtctcgccgtctccggctcctccgccgaggac
gtcgccaacaccctccgcatccaccaccccgagctccgccgccagaagctcgaccccttc
accgccgccgtccgccgcgccctatcctcactcccttccccctccccctccggatccgac
gacgacgactcctccacctctcgccgccgccgccacgacgcccacgccagcacctcctcc
tccacctccgtctccgaagaggccgcccacccgccgccttcccctgccttcgacgtcacc
aagtccatgcttcgctcccagtacgcctcccagacgcccaaacggaaccccggtactaac
caacagctggagattgaggtgaccgcagagaaggcacgccgactcatcacatccgatggt
ggagacggcggcgatgccaagccagaggccccagctactgcaggagttgtcagaggggag
aaggggccacggtttgctgatctcggagggatggaagcggtgatagaggagctgatgatg
gaagtggtggtgcccctgtgccatccagagctgccacagcgccttggggttaggcctgtt
gctgggctgctgctgcacgggccgcctggttgcgggaagaccaccctcgcacatgccatt
gccaatgagactggtgtgccgttctacaagatctcggcacctgaggttgtatctggggta
tctggagcttctgaggaaaatatcaggggcttatttcagaaggcctataggactgctccc
tcaattgtattcattgatgagatagatgcaattgcatccaagagggagagtctgcaacga
gagatggagcgacggatagttactcaattaatgacatgcatggatgaattccatcagaat
attggatcgggtggcgctgatttggatggagaatcatctgaaaagaaacctggttatgtt
attgtcattggagctacgaataggcctgatgctgtggaccaagctctgcgaaggccagga
aggtttgatcgagaaatatctcttggtgttccagatgagaatgcacgaaaacagatactg
aagatgcttactcagaaccttcgacttgaaggcgaatttgacttgttcaagatagcaagg
gccacaccaggttttgttggtgctgacttgaaggcattagtggacaaagcagggaatcta
gcaatgaagagaataattgataaaagaagagttcaatattgtcgtgagcatgacggaaat
agcaagcatgactggtggagaaaaccttgggaggcagatgaggtggagagcctacatatt
atcatggatgactttgaggaagcaacaaaaatggttcaaccatctttgagaagagaagga
ttttcttctgtccctgatgtcacatgggatgatgttggaggtctcgattcattacggaaa
gagtttgaccgctgcattgttcgatgtatcaagcaccctgaagattatgaggtatttgga
gtgaatatgcaagctggcttcatgctgtttggacctccgggttgtgggaaaacactaata
gcaaaagcagtggcgaatgaggcaggggctaattttattcatattaaggggcctgagcta
ttgaacaagtacgttggggagagtgaatcagaagttaggaaaatatttactcgtgcacgt
actaactccccatgcatcctgttttttgatgagatagatgctttgacaacaaaaagaggg
aaagagggaggatgggtggttgagcgtctattaaatcagttacttattgaactcgatggc
gctgatcaacgccaaggtgtgtatgtgataggagctacaaacagaattgatgtgatagat
gatgctgttctacggcctggtagattcgggaaaaaacattatgtgcctttaccttgtgct
gatgagcgagtttccatactaaaagcacatgctagaaacaaacccatctcatctggtgtt
gatttggatgcactggcacgtcgaaaagagtgcaacgatctcactggtgccgacctagca
tcactggtgaatgaagcagccatggcagcgttggaagagagattggaattcattgagaat
gggacatcgtcaatgagttcctcttgtttgattgagctctcacactttgtaagggctcta
tcgaaggtgaagccatcagtatccgaacagcaaaggaaatattacgaggtgttgtccaag
agatactcctcaaactga
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