Phragmites australis (common reed): 133926114
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Entry
133926114 CDS
T10575
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133926114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133926114
03110 Chaperones and folding catalysts [BR:
paua03110
]
133926114
03029 Mitochondrial biogenesis [BR:
paua03029
]
133926114
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
paua04147
]
133926114
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
133926114
Messenger RNA biogenesis [BR:
paua03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
133926114
Chaperones and folding catalysts [BR:
paua03110
]
Heat shock proteins
HSP60 / Chaperonin
133926114
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
133926114
Exosome [BR:
paua04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133926114
Exosomal proteins of other body fluids (saliva and urine)
133926114
Exosomal proteins of breast cancer cells
133926114
Exosomal proteins of colorectal cancer cells
133926114
Exosomal proteins of bladder cancer cells
133926114
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
133926114
NCBI-ProteinID:
XP_062227866
LinkDB
All DBs
Position
8:complement(746163..751061)
Genome browser
AA seq
597 aa
AA seq
DB search
MASTFGATSTVGLMATPTGKTSSLSLVSSISTTNRPQNARLQRRSNFRVKAAKELYFNKD
GSATKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDGVTVAKEVELEDPVENI
GAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQITRGIEKTAKALVE
ELRKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTLEEGRSSENNLYVV
EGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLINVLEEAIRGAYPILII
AEDIEQEALATLVVNKLRGSLKIAAIKAPGFGERKTQYLDDIAILTGGTVIRDEVGLSLD
KADKSVLGTAAKVVLTKETTTIVGDGSTQEEVTKRVAQIKNLIEAAEQEYEKEKLNERIA
KLAGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGCTLLRLAAKVDAIK
DTLENDEQKVGAEIVRRALSYPLKLIAKNAGVNGSVVTEKVLSNDNLKHGYNAATGQYED
LMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVEIKEPEPAAPLTNPMDNSGYGY
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaacatttggtgccacttctacggttggtctcatggcaactccaactggcaag
acatcttcattatctttggtgtcatctatctccactaccaaccggccacaaaatgcgcgc
cttcagaggaggtccaacttcagagtaaaagcagcaaaggagctgtacttcaacaaggat
ggttcagctaccaagaagctccagactggagtcaataagctcgcagacctagttggagtt
acactgggaccgaagggaaggaatgttgttttggagagcaagtatggctctcctaagatt
gtcaatgatggtgttacagttgcaaaagaggttgagctggaggatcctgttgaaaacatt
ggtgctaagttggttaggcaagctgcagctaaaaccaatgatctagctggagatgggaca
actacttctgtggtccttgctcaggggctgattgctgagggtgttaaggttgtggcagct
ggtgctaatcctgtacagattacccggggtatcgagaaaacagcgaaagcactggttgaa
gaactacggaagatgtcaaaggaggttgaagatagcgaacttgcagatgttgctgcggta
agtgctggcaacaactatgaaattggtaacatgatagcagaggctatgagcaaggttggc
cggaagggtgtggttaccctcgaagagggaaggagttccgaaaacaatctctatgttgtg
gagggaatgcaatttgatcgtggttacatctctccttactttgtaactgacagtgagaaa
atgtctgtcgagtacgagaactgcaagctacttttggtggacaaaaaaatcaccaatgca
agggatcttatcaacgttttggaggaagccatcagaggtgcatacccaatcctgataatt
gctgaggatattgagcaggaggctcttgctacccttgttgtcaacaagctcagaggatca
ttgaagattgctgctatcaaagcccctggttttggagagcgcaagacccaatacctggat
gatattgccatacttactgggggaactgtaatcagagatgaagttggattgtcacttgac
aaggcggacaaatcagttcttgggacggctgctaaggttgtccttaccaaagagacgaca
acaatagttggtgatggcagcacccaggaagaagttactaagagggttgcacaaataaaa
aatctcatcgaggcagcagaacaagaatatgaaaaggaaaagctcaacgagaggatagca
aagctcgctgggggtgttgctgtcattcaggtgggagcacaaacagaaactgaactaaaa
gagaagaagttgagagttgaggatgccctaaatgcaactaaggctgctgttgaggaaggt
attgttgttggtggagggtgtacccttttgaggctggcagctaaagtagatgccatcaag
gacacgttggagaacgatgagcagaaggttggagctgaaatagtgaggagggccttgagc
tacccacttaaattgattgctaaaaacgctggtgttaacggcagcgttgttactgagaag
gttctttctaatgacaacctcaagcatggttacaatgctgctactggccagtatgaagac
ttgatggctgccggtatcattgaccccactaaggtggtgagatgctgcttggagcacgcg
gcgtccgtggccaagaccttcctcacgtcggacgtcgtcgtcgtcgagatcaaggagcct
gagcccgccgcacctctcactaacccgatggacaactctggctatggatactga
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