Phragmites australis (common reed): 133926156
Help
Entry
133926156 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133926156 isoform X1
KO
K13254
spastin [EC:
5.6.1.1
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133926156
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
paua04812
]
133926156
Enzymes [BR:
paua01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.1 microtubule-severing ATPase
133926156
Membrane trafficking [BR:
paua04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
133926156
Cytoskeleton proteins [BR:
paua04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
133926156
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
Vps4_C
NPHP3_N
AAA_22
AAA_14
TIP49
Mg_chelatase
AAA_2
IstB_IS21
AAA_25
DUF815
nSTAND3
RNA_helicase
Guanylate_kin
AAA_33
DUF4368
AAA_24
Motif
Other DBs
NCBI-GeneID:
133926156
NCBI-ProteinID:
XP_062227927
LinkDB
All DBs
Position
8:1380289..1385463
Genome browser
AA seq
489 aa
AA seq
DB search
MSLLRALADTFSSLLFSSGGGAGAPMDAAAPSAAAVVGERVAVKLRGYFELAKEEIDKAV
RAEEWGLPDEAAAHYRNAQRVMLEAKAARVPDAVSSSERGQVRVYQEKIAKWQAQVEERL
RVLGQRSGEGAAAAVEPKKVVTSNPISRTSKPAPTSIQKSTLRNNPSFNRGGQASVPQKN
NSGGSEPVQRAGGSYDDKLVEMINTTIVDRSPAVKWDYVAGLDNAKQALMEMVILPTKRR
DLFTGLRRPARGLLLFGPPGNGKTMLAKAVASESEATFFNVSASSLTSKWVGEAEKLVRT
LFMVAIDRQPSVIFMDEIDSIMSTRLANENDASRRLKSEFLIQFDGVSSNPDDLVIVIGA
TNKPQELDDAVLRRLVKRIYVSLPDHNVRRLLLKNQLKGQAFKLSGHDFERLALETEGYS
GSDLRALCEEAAMMPIRELGPQNILTVKANQLRPLKYEDFKNAMTVIRPSLQKSKWDELE
KWNEEFGSS
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcctccgcgcgctcgcggacaccttctcgtcgctgctcttctcttcgggaggc
ggggcgggggctcccatggacgcagcggcgccgtcggcggcggcggtggtgggggagcgc
gtggcggtgaagctcaggggctatttcgagctcgccaaggaggagatcgacaaggccgtg
cgagcggaggaatgggggcttcccgatgaagccgccgcgcactaccgcaacgcccaacgc
gtcatgctcgaggcaaaggccgcgcgggtccccgacgctgtctcgtccagtgagaggggg
caggtcagggtgtatcaggagaagatcgccaagtggcaggcacaggtcgaggagcggctc
agagtgctcggccagaggagtggtgaaggagctgctgctgcagtagagccgaaaaaggtt
gttacaagcaatcctataagtaggacttcaaaaccagcaccaactagtatccaaaagtct
actttgcgaaataaccctagctttaacagaggtggacaagcatctgtacctcagaagaat
aacagtggaggttctgaacctgttcaaagagctggtggaagctatgatgacaagcttgtc
gaaatgataaatacaaccattgtggacagaagtcctgctgtcaaatgggattatgttgct
ggtcttgacaatgcaaaacaagcacttatggaaatggttattttgcctactaaacgaagg
gatttgttcaccggccttcgaagacctgctaggggtttgcttctctttggaccacctggg
aatggaaaaacaatgcttgccaaagctgttgcatcagaatcggaagcaacattttttaat
gtttcagcttcttcattgacatcgaagtgggtaggggaggctgaaaagcttgttcgtaca
cttttcatggttgctattgatcgacaaccatctgttatttttatggatgagattgatagc
atcatgtcaacaaggttagctaacgagaatgacgctagcaggcgactgaaatctgaattc
cttattcagtttgatggggtatcttcgaacccggatgatttagtaattgttataggggct
acaaataaaccacaagagttggatgatgctgtgcttcgaagactggtaaaaagaatatat
gtctcactacctgatcacaatgtacggaggttacttctgaaaaatcagctcaaaggacag
gcattcaaattgtccggtcatgattttgaaagacttgctttggagactgaaggatattct
ggaagtgacctgagagccttgtgcgaggaagctgcaatgatgccaataagagagcttggt
ccacagaatattcttactgttaaggcaaatcagttgcgacctttgaagtacgaagatttc
aagaatgcaatgactgtgattaggccaagcttgcagaagagcaaatgggatgagctggag
aaatggaacgaggaatttggttcaagttga
DBGET
integrated database retrieval system
