Phragmites australis (common reed): 133926218
Help
Entry
133926218 CDS
T10575
Name
(RefSeq) probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic isoform X1
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00730
Thiamine metabolism
paua00900
Terpenoid backbone biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
133926218
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133926218
Enzymes [BR:
paua01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
133926218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
Motif
Other DBs
NCBI-GeneID:
133926218
NCBI-ProteinID:
XP_062228003
LinkDB
All DBs
Position
8:complement(2118422..2123382)
Genome browser
AA seq
721 aa
AA seq
DB search
MDTAFLRSPLIRNLVYEDCALLHSRSYHCYALQYVRCNRTDLKPCQTLSASPLRGLTHRL
AALPDVDDFFWEKDPTPILDTIDAPIHLKNLSSKELKQLANEVRSEISFIMSRKCQPCSP
GHSVVELTIAIHYVFNAPMDKILWDAGQHAYAHKILTGRRSLFHTIRQKNGLSGFTSRFE
SEYDPFGAGHGCNSLSAGLGMAVARDINGRKNRIVTVISNWTTMAGQVYEAMGHAGFLDS
NMVVILNDSCHTLLPKADGRPKMSVNAFSSALSKVQSSKGFRRFREAAKGLTKWFGKGMH
EFAAKVDEYARGMIGPHGATLFEELGLYYIGPIDGHNIDDLICVLKEVATLDSTGPVLVH
VITGTENDTGGNIKSDITTNEEEPSNSSHALLKFLESGLSRTYNDYFVEALTTEAENDKR
IVVVHGGMGVDRSLRLFQSRFPDRFFDLGIAEQHAVTFSAGLACGGLKPFCIIPSTFLQR
AYDQIVEDVDMQKIPVRFAITNAGLVGSEGPTNSGAFDITFMSCLPNMIVMSPSNEDELI
DMVATAAMIEDRPICFRYPRGAIVGTSSTLTYGNPLEIGKGEILAEGKEIAFLGYGEVVQ
RCLIARSLLSNFGIQATVANARFCKPLDIDLIRTLCQQHSFLITVEEGTVGGFGSHVSQF
ISLDGLLDGQIKWRPIVLPDRYIEHASLAEQLDLAGLTAHHIAATALTLLGRHRDALLLM
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatacggcgtttctgcgttctccactcattcgtaatttagtgtacgaagattgtgcc
cttctgcactccagaagttaccattgctatgctcttcagtatgtgagatgcaatcggaca
gatttgaagccgtgccaaactctatctgcttcgccattgaggggtttgactcacagattg
gccgcattacctgatgtcgatgattttttctgggagaaggaccctacaccaatcctggac
acaatcgatgcaccaattcatttgaaaaatctatctagtaaggagctgaagcagttggct
aatgaagttcgctcagaaatatctttcataatgtccagaaaatgccagccatgtagtcct
ggccattcagttgtggagctgacaattgctatacattacgtgttcaatgccccaatggat
aagatactatgggatgctggtcagcatgcatatgcgcacaagattctcacaggaaggcgc
tctctgttccataccattagacaaaaaaatggcctttctggtttcacatctcgttttgag
agcgagtatgatcccttcggtgctggacatggatgcaatagtctttctgctggcctgggg
atggcggttgcaagggatataaatgggaggaaaaatcgaatagtgacagttatcagtaat
tggacaaccatggctggccaagtgtacgaggcaatgggtcatgctggtttcctcgattct
aacatggttgttattctaaatgatagctgtcacaccttgcttcctaaagcagatggccgg
ccaaagatgtcagtcaacgccttttctagtgctctcagcaaggttcaatccagcaaagga
tttaggaggtttagggaggctgcaaagggacttactaaatggtttggcaaagggatgcat
gaatttgctgccaaggttgacgagtatgctcgtggtatgataggtcctcatggagcaacc
ctttttgaagaacttggactgtattatattggtcctattgatgggcataacattgatgat
ctaatctgtgtacttaaggaggtcgccactttagattcaactggtccagtacttgtacat
gtaattactgggacagaaaatgacactggtggcaatattaagagtgacatcactacaaat
gaggaagagccttcaaactcaagccatgctcttcttaagtttttagagagtggactttct
aggacatataatgactattttgtggaagcactgacaacagaagcagagaatgacaagcgc
attgtggtagttcatggtggcatgggagtggatcgatcactccgtttattccagtccaga
ttcccagacagattttttgacttgggcatcgccgagcaacatgctgttaccttttctgct
ggtttggcatgtggaggtttaaaacctttctgcataattccatcaacatttcttcagcga
gcatatgatcagatagttgaagatgtggacatgcaaaagataccagttcgatttgcaatc
acaaatgctggtctggtggggtcagaggggccaactaattcaggagcatttgacattaca
ttcatgtcatgcttgccgaacatgattgtcatgtcaccatctaatgaggatgaacttatt
gacatggtagcaacagctgcaatgattgaggacagacctatttgcttccggtatcctagg
ggtgccattgttggaactagcagtactttaacatatgggaatccacttgagattggcaaa
ggagagattcttgccgaaggaaaagagatagcttttctcggctatggtgaagtggttcag
agatgcttgatagctcgatctcttctatccaactttggcattcaggcgactgttgccaat
gcgagattttgcaagccacttgacattgatttaatcagaacgttatgccaacagcacagt
tttcttatcacggtggaagaaggaacagttggtggctttggctcgcatgtctcacaattt
atttcactcgatggtctactagatggccaaataaagtggcgacccattgtgctgccagac
aggtacatagaacatgcttcgctcgctgagcaactcgatttggctggcctaactgctcat
catatagccgcaactgcattgactctccttgggcgacaccgggacgcacttttgttgatg
aagtaa
DBGET
integrated database retrieval system
