Phragmites australis (common reed): 133926362
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Entry
133926362 CDS
T10575
Name
(RefSeq) two-component response regulator ORR22-like
KO
K14491
GARP family transcription factor, ARR-B subfamily
Organism
paua Phragmites australis (common reed)
Pathway
paua04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
133926362
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133926362
Transcription factors [BR:
paua03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-like factors
133926362
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Ortholog
Paralog
GFIT
Motif
Pfam:
Response_reg
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
133926362
NCBI-ProteinID:
XP_062228267
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All DBs
Position
8:4440254..4445210
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AA seq
648 aa
AA seq
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MLLGAVRMEEKKGDVMGRERGQFPVGMRVLAVDDDPVCLKVLETLLRRCQYHVTTTNQAI
TALKLLRENRDMFDLVISDVHMPDMDGFKLLELVGLEMDLPVIMLSVNGETKSVMKGITH
GACDYLLKPVRIEELRNIWQHVVRRKFSKRERSNLDIYKEFNKPPSADSCHGHIQIIGGA
SDPSGRIIKKRKELHSDDEDDGEENDFQEGDEPSAAKKPRVVWSVELHRKFVAAVNQLGI
DKAVPKRILELMNVEKLTRENVASHLQKYRLYLKRLSVVASQQASIVAALGGRDPSFLHM
GAFEGLQSYQLFPPSAALSSFNPHGLLGRTSATTFGLQELVPTKPIQTATNNCTTSHSAG
DTNKFQFVGLQENQQANLTQCSTLPLGQSQLQQKWIHQETNDLSTVFSGSALANTMSSTF
QGVTSSPLPPQELLECTQVSVQPSVRMPSVSSELLEGTVGVSTSLRDSSISQQGALSIND
GFSADKLPPNNPFESTSAAKLGTTFVASQREIDQNGKFSVSSASGGASSSSSTLLLPPYT
ERHLNYMQFGVSSNGSFNHNVGACMTEQRNASVPSLMPQMKIHTLTSEDKLKQKNICDLG
ISKLNGGFNSSSCNFDGLLNSMIKMEKDDISFTDNDMGCDFFPLGACI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgcttttgggcgctgtgaggatggaggagaagaagggggatgtgatggggagggagagg
ggtcagttcccggtcggcatgcgtgtcctcgctgtcgacgatgacccggtgtgcctcaag
gttctcgagaccctcctgcggcgctgtcaataccatgtaacaacaaccaaccaggccatt
actgcactgaagctgttacgggagaacagggacatgtttgatctggttatcagtgacgta
catatgcccgacatggatggctttaagctccttgagcttgtagggcttgaaatggacctc
cctgttatcatgttatcggtgaatggagagacaaaatccgtgatgaaggggataactcat
ggcgcctgtgactatctcctgaaaccagttcgtatcgaagagcttaggaatatatggcag
catgttgttaggaggaagttcagtaagcgcgaacgcagtaatcttgatatctacaaagaa
ttcaataagccaccaagcgcagattcatgccatgggcacattcagatcattggtggggct
tctgacccaagtgggaggatcatcaagaagaggaaggaactgcatagtgacgatgaagat
gacggcgaggagaatgattttcaagaaggtgatgaaccctcagcagctaagaagccaaga
gttgtttggtcagttgaactgcatcggaaatttgttgcggctgtcaaccagcttggaatt
gataaagctgtaccgaaaagaattcttgagcttatgaatgtggagaaactcaccagggaa
aatgttgcgagtcatctacagaaatacaggctctacctcaaacgtttaagtgtcgtggcg
tcacaacaagctagcattgttgctgctcttggaggtagagacccctcctttcttcacatg
ggagcatttgaaggacttcagagttaccaacttttccccccttctgctgctctatcatct
ttcaacccacatggcttactgggtagaacaagtgcaacaacatttgggcttcaggagctt
gttcctaccaagccaattcaaactgctactaacaactgcacaacaagtcacagtgctggt
gatacaaacaaatttcagtttgtcggtttacaagaaaaccaacaggcaaatctaacacaa
tgctcaaccttgcctcttgggcagtcccaactccagcagaagtggatccatcaagaaact
aatgatttgtctaccgtcttttctgggagtgcactggctaacactatgtccagcacattc
caaggagttacaagcagtccattgccaccgcaagaacttttggaatgcacgcaagttagt
gtccaaccatcagtaagaatgccgtcggtgagttccgaactgcttgaagggactgttgga
gtttccactagtttacgggattcaagtatatcccaacagggtgccctttcaataaatgat
ggattttccgccgacaagttaccaccgaacaatccatttgagagcaccagtgcagcaaaa
ttgggtactacctttgtggcttcacaaagagagatagaccaaaacgggaaattttcagta
agcagtgccagtggtggagctagttcttccagcagtacattgctgctccctccttatact
gaaagacatctaaactacatgcagtttggtgtttcaagcaatggaagtttcaaccataat
gttggtgcctgtatgactgaacagagaaatgcaagtgtgccatctcttatgccacaaatg
aagattcacacgttaacatcagaagataaactgaagcagaagaatatttgtgatttgggt
atttcaaagctgaatggtggttttaactctagtagctgcaattttgatggccttctcaat
tccatgatcaaaatggagaaggatgatatctcgttcaccgataacgacatggggtgtgac
ttttttccacttggtgcctgcatatga
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