KEGG   Phragmites australis (common reed): 133926462
Entry
133926462         CDS       T10575                                 
Name
(RefSeq) putative transcription elongation factor SPT5 homolog 1
  KO
K15172  transcription elongation factor SPT5
Organism
paua  Phragmites australis (common reed)
Pathway
paua03250  Viral life cycle - HIV-1
Brite
Transcription machinery [BR:paua03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     133926462
  RNA polymerase I system
     133926462
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     133926462
SSDB
Other DBs
NCBI-GeneID: 133926462
NCBI-ProteinID: XP_062228399
LinkDB
Position
8:6449423..6457206
AA seq 1042 aa
MARRGRDEDDDEVEEEEEEEEEAYDVDEEEDEEDDYEEEARRGKASRGGGGGGGRKRSRE
DNFIDDSAIEDEDEDDDGGGRQRKKGGGVRGFFDEEAQVDEEEEEEDDDGEGEDDFINDA
GAEIPDEDVVRGSRRHSIPMRDEEEDIDEIERQVRERYARSSHIEYGEEAAEVEQQALLP
SVKDPKLWMVKCAIGHERETAICLMQKFIDRPDLQIKSVVALDHLKNYIYVEAEKEAHVK
EACKGLRNIYASAKITLVPIKEMADVLSVESKSVDLSRDTWVRMKLGIYKGDLAKVVDVD
NVRQRVTVKLIPRIDLQALASKLEGREAVKKKTFVPPPRFFNIDEAREMHIRVERKRNKE
TGEYFEMIEGLMFKDGFLYKSVSIKSINTQNIQPTFDELEKFKKPGDDMNGDMASLSTLF
ANRKKGHFMKGDAVIVIKGDLKNLEGWVEKVEDETVHIRPKISDLPKTLAFHEKELCKYF
KPGDHVKVISGVQEGATGMVVKVEGHVLIILSDTTKEHIRVFADHVVESSEITTGITRIG
DYELHDLVLLDNLSFGVIIRVETEAFQVMKGVPDRPEVVLVKLREIKNKIDRRASAKDRA
NNIISTKDVVRIVEGACKGKQGPVEHIHKGILFIYDRHHLEHAGFICAKAQSCLLVGGST
GGRRGNGMDTADARLGALRSPASILQSPGRLPPRGPHMNYGGRFGGGGRGGRGHDALVGK
CIKIKSGPYKGYRGRVKEVTGALVRVELDSLMKIVTVKRDDIADTPTVATPFREPRYSLG
GETPMHPSRTPLHPYQTPMRDPGATPIHDGMRTPMRSRAWAPMSPPRDNWEDGNPATWGS
SPAYQPGTPPARPYEAPTPGSGWANTPGVSFNDAPTPRENYANAPSPYVPSTPVGQPMTP
NSASYLPGTPGGQPMTPGNVGMDIMSPIIGGEGEGSWLLPDVLVNVLRGGDDGPGVVREV
LADGSCRIALGLSGNGDIVTVLPTEVEVIRPKKSDRIKIMNGNFRGFMGKLIGIDGSDGI
VKLDDTYEVKILDMVILAKLAT
NT seq 3129 nt   +upstreamnt  +downstreamnt
atggctcgccgcggccgcgacgaagacgacgacgaggtcgaagaggaggaggaggaagag
gaggaggcctacgacgtggacgaggaggaggatgaggaggacgactacgaggaggaggcg
aggcgcgggaaggcctcccgcggcggcggcggcggcggtgggcggaagaggtcgcgagag
gacaacttcatcgacgactcggccatcgaggacgaggatgaggacgacgatggcgggggc
cggcagaggaagaagggtggcggggtgcgcgggttcttcgacgaggaggcgcaggtcgat
gaggaggaggaggaggaggatgacgacggcgagggcgaggacgactttatcaatgatgct
ggggctgaaattcctgatgaggatgttgttaggggctcaagacgtcattcgattcctatg
agggatgaagaagaggacattgatgagattgaaagacaagtacgagagagatatgcaaga
tcttctcatattgagtatggtgaggaagctgcagaagtggaacagcaagctctcttgcca
tcagtgaaggatccaaagctatggatggttaaatgtgcgattgggcatgagagggagaca
gcgatttgtctgatgcaaaagttcatcgataggccagatcttcagataaagtctgttgtt
gcgttagaccatctaaaaaattatatttatgttgaagctgaaaaggaggcccatgtcaag
gaggcttgcaaaggcctacgaaacatttacgcttcagcaaaaataacattagttccgata
aaagaaatggcagatgtcctctctgttgagagcaaatctgttgatctttcaagggatact
tgggtccgaatgaagctgggtatatataaaggtgatcttgctaaggttgttgatgttgat
aatgtacgtcaaagggtaactgtgaagctcattcctagaatagatctacaagctttggct
agtaaactggaaggaagggaggctgtaaagaagaaaacatttgtcccaccaccacgattc
ttcaatatcgatgaggcgagggagatgcacattcgtgtggagcggaagcgtaataaagag
actggggagtactttgagatgattgagggtttgatgttcaaagatggtttcttgtataaa
tcggtctcaataaaatcaatcaacacacaaaatattcagccgacattcgatgaactggag
aaattcaagaagcctggtgatgacatgaatggggatatggctagcctgtccactctgttt
gcaaacaggaaaaaagggcacttcatgaagggtgatgctgttattgttattaaaggcgat
ttaaaaaatttggaagggtgggttgagaaagtagaggatgaaactgttcacatcagaccg
aaaatatctgatcttccgaaaacattagccttccacgagaaagagctttgcaagtatttc
aaacctggagaccatgtaaaagtgatctcaggtgttcaagaaggtgctaccggcatggtt
gttaaagtggaagggcatgtcttgatcattttatcagacacaactaaagaacatatccgt
gtgtttgcggatcatgttgtggaaagctctgaaattaccacaggaattaccagaattggt
gattatgaactgcatgatcttgtccttttggacaacttgtcatttggggtaattataagg
gtggaaactgaagcatttcaggttatgaaaggagtgccggatagacctgaagttgtactt
gtaaaattaagggaaataaaaaacaaaattgatcggcgtgcatcagctaaagatcgtgca
aataatattatatcaaccaaggatgttgtaaggattgttgaaggagcatgcaagggaaag
caaggacctgtggaacacatacacaaggggatactgtttatctacgacaggcatcacctt
gaacatgcaggctttatttgtgcaaaagcacagtcttgtcttcttgttggtggatcaacc
ggtggccgtcgtggaaatggcatggatacagcagatgcacggcttggtgctttgaggtct
ccagcaagcattttgcaatccccaggaaggctgcccccaagaggacctcacatgaattat
ggtggaaggtttggaggaggtggtcgtggtggtagagggcatgatgccttggtgggcaaa
tgtatcaaaattaaatctggtccttataaggggtaccgtggccgtgtcaaagaggtgact
ggtgcacttgtacgtgtggagcttgattcattgatgaagattgttacagttaagagggat
gatattgctgatacacctacagtggcgacaccattccgtgaacctcgttattcattgggt
ggtgaaacaccgatgcacccatctcgaacgccacttcatccttatcagactccaatgcgg
gaccctggagcaacaccaatacacgatgggatgcggactcctatgcgtagtcgagcctgg
gctcctatgagccctccgagggataattgggaagatggaaatcctgctacttggggtagc
agtccagcttaccagcccggaactccaccagctcggccatacgaagcccccacacctgga
tcagggtgggcaaatactccaggagttagtttcaatgatgctccaactcctagggagaac
tatgcaaatgctccgagtccatacgtgccttccacacctgttggtcaaccgatgacacca
aattctgcctcgtatcttcccggaacacctggtggtcaaccaatgactccaggcaatgtt
ggaatggatataatgtcccccataataggtggtgagggcgagggtagctggttgctacca
gatgttttggtcaatgtattgaggggaggtgacgatggccctggtgtggtcagagaagtg
ctcgcggatggatcttgccgcatcgcactggggttgtcgggcaacggtgatattgtgaca
gtacttccaactgaggtcgaggtcatcaggccaaagaagagcgacaggatcaagataatg
aatggcaacttccgtggattcatgggaaagctaataggaatagacggttctgacggaatt
gtgaagctggacgacacatacgaagttaagatattagatatggtgattttggcaaaactg
gcgacttga

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