Phragmites australis (common reed): 133926612
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Entry
133926612 CDS
T10575
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133926612
04121 Ubiquitin system [BR:
paua04121
]
133926612
Transcription factors [BR:
paua03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
133926612
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
133926612
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
NCBP3
R3H
Motif
Other DBs
NCBI-GeneID:
133926612
NCBI-ProteinID:
XP_062228611
LinkDB
All DBs
Position
8:complement(11056774..11060594)
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AA seq
1122 aa
AA seq
DB search
MQPSTDRRRGGGPAAAPSSRPVWRPRSSAPAPAPAPVAAPDSTAPFLPLPTPASQTRPPQ
RRPRRPNHGNNANNNRRAAPSQEQNNTNNHRRRPPPPQEHNNNAGHHRRGPPQERPAPAA
PGNARAHAPAPAAVGGDGSVPQLVQEIQDKLARGAVECMICYDMVRRSAPVWSCGSCFSI
FHLPCIRKWARSPASAADGSAESAAASSWRCPGCQSVLSIPARDLAYTCFCGRRRDPPND
LFLTPHSCGEPCSKPLERVEPIAKGDDAAATRCPHVCVLQCHPGPCPPCKAFAPDRPCPC
GKQIIVRRCADRSTPVTCGRPCERLLPCRRHRCEKVCHTGPCGDCAVLISARCFCGKKKE
TLLCGDMAVKGKLSEEDGVFSCSEVCGHTLACGNHACQDMCHPGPCGECELMPGKVTTCH
CGKTRLQEMRASCLDPIPTCDKVCDKKLPCGVHRCKVNCHEGECPPCLVRVEQRCRCSSS
GRMVECYKVSMEEFHCNKPCGHKKNCGRHRCSECCCPRSRKFAQLEFGNWDLHLCQITCG
KKLGCGQHVCQLLCHSGHCPPCLETIFTDLTCACGRTSILPPLPCGTPTPSCPHQCSVPQ
PCGHPASHACHFGDCPPCVVPVMRECIGGHVMLRNIPCGSKDIRCNQPCGKNRQCGLHAC
TRTCHPSPCDQPPANGDASSSSGAKASCGQVCGVPRRECKHTCTAPCHPSSPCPDLRCEF
PVSITCSCGRFIATVPCGAGGASNGGDNMFEVSIIQKLPMPLQPVESNGRRVPLGQRKLS
CDEECAKVEKKRVLAEAFDITPPNLDAFHFGENTNSADLVSDLFRREPKWVLAIEERCKF
LVLGKMRGNFSSNLKLHVFCHMMKDKRDAIRLIADRWKLSVHAAGWEPKRFVTIHVTPKS
KPPARILGSKAGAPITAAHPYFDPLVDMDPRLVVAMLDLPREADVNSLVLRFGGECELVW
LNDKNAVAVFNDPARAATALRRLDYGSAYHGAAMFLPSSAQPSSSGNVWVAGQKDGVFAA
KSGGNPWKKVSAAEPEPEPAARAAPAPGWRGASTAAQVMGTPNRWNVLESDAATSSGPGD
ERRPAPRTDAAYSAVPNAENAGPSVSKLQPDVEVDDWEEACE
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgcagccctccaccgatcgccgccgtggaggcggcccagccgcggccccatcctctcgc
cccgtgtggcgcccccgctcctccgcccccgcccccgctcccgcacctgtcgcggccccc
gactcaaccgccccgttcctgcccctccccaccccggcctcgcagacccgcccgccccag
cgccgcccgcgccgcccgaatcacggaaacaacgcgaacaacaatcgccgcgcggccccg
tcgcaggagcagaacaacacgaacaaccatcgccgccgcccgccaccgccgcaggagcac
aacaacaatgccggtcaccatcgccgcggcccgccgcaggagaggccagctcctgcggcc
ccagggaacgcgcgcgcccatgcccctgcacccgctgcggttgggggcgatgggtcggtg
cctcagctggtgcaggagatccaggacaagctggcgcggggggcggtggagtgcatgatc
tgctacgacatggtgcggaggtcggcgcccgtctggtcctgcggcagctgcttctccata
ttccacctcccctgcatccgcaagtgggcgcgctccccggcctccgccgccgatggctcc
gcagagtccgccgcggcctcctcatggcgctgccccgggtgccagtccgtactctccatc
ccggcccgcgatctcgcctacacctgcttctgcggacgacgacgggatccccccaacgac
ctcttcctcacgccccattcctgcggtgagccctgctccaaacctctcgagagggtggaa
ccgattgccaagggtgacgatgctgccgctaccaggtgcccgcacgtctgcgtcctgcag
tgccacccgggcccgtgcccaccctgcaaggcttttgcgccggatcggccgtgcccctgt
gggaaacagattatcgtgcggcggtgtgcagaccggagcacgccagtaacctgcggtcgg
ccttgcgagcggctgctgccctgcagaaggcaccgctgtgagaaggtctgccacaccggg
ccctgtggggattgcgctgttctcatctctgcacggtgcttctgtgggaagaagaaggag
acgttgctatgtggggacatggctgtgaaggggaagctgtcggaggaggatggggtgttc
tcatgtagtgaggtgtgtggccacacgctcgcctgtgggaatcatgcctgccaggatatg
tgccacccagggccttgcggtgagtgcgaactcatgccagggaaggtcactacatgccat
tgtggcaagacaaggctgcaggagatgagggcaagctgcttggacccaatcccaacctgt
gacaaggtctgcgataagaaattaccatgtggggtgcataggtgcaaggtcaattgccac
gagggagagtgcccaccttgcttggtgcgtgttgagcagaggtgccgctgtagctcatca
ggccggatggtggagtgctacaaggtttcgatggaagagttccactgcaacaagccttgt
ggtcacaagaagaactgcgggaggcatcggtgcagtgagtgttgttgcccacggtcaagg
aagtttgcacagcttgaatttggtaactgggatctccatctctgccagataacatgtggc
aagaagctcgggtgtgggcagcatgtgtgccagctgctctgccacagtggtcactgccca
ccctgcttggagaccatattcactgatctcacttgcgcctgtggcagaacttctatcctg
ccgccactgccttgtggcacaccgactccatcatgcccacaccagtgctcagttccccag
ccgtgcgggcatccagcctcacatgcatgccattttggggactgcccgccttgcgttgtg
ccagtaatgagagaatgcattgggggacatgtgatgttgagaaacatcccttgtggatcg
aaggatatcaggtgcaaccaaccatgtgggaagaaccggcagtgtggattgcatgcttgc
accaggacttgtcatccttccccctgtgaccagccaccagcaaacggagatgctagctca
agctctggggccaaagcttcttgtggacaggtatgcggtgtcccaaggagggaatgtaag
cacacgtgcactgctccatgccacccatcgtcaccttgcccagatttgaggtgtgaattc
cctgtgtccattacctgttcttgtggtcgtttcattgccactgttccctgcggtgctggg
ggggcctccaatggtggtgataatatgtttgaagtctctatcatacagaagttgccaatg
cctctccagccagtggaatcaaatgggagaagggtgcctcttgggcagaggaagctttct
tgtgatgaggagtgtgcaaaggtggaaaagaaaagggtccttgctgaagcatttgacatt
accccacccaatttggatgcatttcattttggtgagaacacaaattcagcagatttggtt
tctgacctgttccgacgtgagccaaagtgggtgctggccatagaagagaggtgcaagttc
cttgtccttgggaagatgagaggcaatttttcaagcaacctcaaactgcatgtgttctgt
cacatgatgaaggacaagagagatgctatcaggctcattgcagataggtggaagctttct
gttcatgcggctggttgggagcctaagcgttttgttaccatccatgtcacacccaagtcg
aaaccacctgcccgcatcctgggctccaaggcaggtgcccctatcaccgccgcccatcct
tactttgatcctctggttgacatggatccaaggctggttgttgcaatgctggacctgcca
cgggaggctgatgtgaattccctagtcttaaggtttggtggagagtgtgaattggtctgg
ctgaatgacaagaatgcagtggctgtcttcaatgatccagctagagcagcaacagcactg
aggcggctggattatgggtctgcttaccatggcgctgcaatgtttttgccaagcagcgct
cagccatcttcgtctggcaatgtgtgggttgcaggtcagaaggatggagtgttcgctgct
aagagtggtggcaatccgtggaagaaggtttctgctgctgagcctgagcctgagcctgca
gctagagcagctccagcacctgggtggagaggcgccagtactgctgctcaagtcatgggg
actccgaaccgctggaatgttctggaatctgatgctgccacgagctctggtccaggtgat
gagcggagacctgctcctcgcaccgatgctgcatacagcgcagtaccaaatgctgagaac
gctgggccgtcggtgagcaagctgcagccggatgtcgaggtggatgactgggaggaagct
tgtgaatga
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