KEGG   Phragmites australis (common reed): 133926625
Entry
133926625         CDS       T10575                                 
Name
(RefSeq) THO complex subunit 4D-like isoform X1
  KO
K12881  THO complex subunit 4
Organism
paua  Phragmites australis (common reed)
Pathway
paua03013  Nucleocytoplasmic transport
paua03015  mRNA surveillance pathway
paua03040  Spliceosome
Brite
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     133926625
    TREX complex
     133926625
Spliceosome [BR:paua03041]
 Complex C
  Other components
   EJC/TREX
    133926625
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    133926625
SSDB
Motif
Pfam: RRM_1 FoP_duplication
Other DBs
NCBI-GeneID: 133926625
NCBI-ProteinID: XP_062228624
LinkDB
Position
8:complement(11460886..11466001)
AA seq 298 aa
MATSLDVPLDDLIKSRSGRGRGRGRGQGGGQGRGDSQRLACGSWRGRVAGTFRGRGLGVP
SRRPLGVNTRSSSFAIAKSFNKPKDFVWRHDLFEDSMVAAGLSGRESGTKLYISNLHYGV
TKEDIQELFSEMGHLKHCAVHYDNNRRPTGSAEMIFTRRSEALGALKRYNNVHLDGKAMK
IEVIGADLGLSTAVAHRISVAPGARGRGQRVVMMPGANGYGRGASGSSNSLPGWKRGGFA
QRWGGQGHGRGRGRGRGSGRSFGQGRGRGYGRMGPVGKSAEQLDKELDNYHYGAMNVD
NT seq 897 nt   +upstreamnt  +downstreamnt
atggcaacatctttggatgttccgctggatgatttgattaagagcagaagtgggagggga
agaggaagaggcaggggacaaggagggggtcagggcagaggtgacagccaaagattggcc
tgtggttcatggcgtgggcgtgttgctggcaccttccgtggcagggggctaggtgtgcct
tcacgaaggccacttggtgttaatactcgatcctcgtcatttgctattgccaagtcattc
aataaacctaaggattttgtgtggagacatgatttgtttgaggatagcatggtggctgct
gggctttctgggagagaatctggaacaaagctgtatatttcaaatttgcactatggagtg
acaaaggaagatatacaggagcttttttctgaaatgggtcatttgaagcactgtgctgtt
cattacgacaataataggcgcccaactggttcagctgagatgatattcactaggagaagt
gaagctcttggggcattgaagcgatataataatgtgcatcttgatgggaaggcaatgaag
atcgaagtgataggagcagatttgggcctatctactgctgtcgcacaccgaattagtgtt
gctcctggtgcaaggggaagagggcagagagttgtaatgatgcctggtgcaaatgggtat
ggtcgaggtgcgtctggctcatctaattcgcttcctgggtggaagcgtggaggttttgct
caaagatggggaggacaagggcacggtcgtggccgtggccgtggccgtggcagtgggcgt
agctttggtcaggggcgtggacgtggctatggacggatgggacctgtggggaaatcagct
gaacaattggacaaggagcttgacaactaccattatggtgcgatgaatgtcgactaa

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