KEGG   Phragmites australis (common reed): 133926727
Entry
133926727         CDS       T10575                                 
Name
(RefSeq) protein decapping 5-like isoform X1
  KO
K18749  protein LSM14
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:paua03019]
    133926727
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     133926727
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 133926727
NCBI-ProteinID: XP_062228761
LinkDB
Position
8:18659944..18666821
AA seq 650 aa
MASAAAPESYIGSVISLTSKSEIRYEGILYTINTEESSIGLRNVRSLGTEGRKKDGQQIP
ASDKIYEYILFRGSDIKDLHVKSSPPAQPATLLNDPAIIQSHYPRPASLSTSLPSAASTT
AANPTSHNALSGIQMPPPFQGNFPPYQPGASLQSWNSSPMPSSANDTGLTMPPMFWPGYY
APPSGFPHLQPPPFLRPPHGLTVPQALQPPVQYPGLNESLLVGFPSMPELPSFLQPGNSN
SLSQSSGASTSVPAPASSSTSGSQLPNKLSSVSASVFSMGLTPPSASPSISTVERTMPLS
QGTSSLVNSKPVALPYSSLLSLSSDKPVSVPASIPTYLPSSQPPSANVGPTVNVVEPVTL
VIPGQLLPTTSSMVISSHALQTASAMVPSSKAASSTVPSSQATSSVVPSSQATSAIVSPS
QVASSSVLSSQQLEVSRENKDAKQREWKAKQPAVAQSENNEPQLPTPKPVHQKPVGASLY
VQYNNRGRGRVQGRGNGQSRPITKFTEDFDFTAMNEKFNKDEVWGHLGKSKRLLNDERND
YEDDVLEDDDISPRKLEAKPVYVKDDFFDSLSCNTINNGGRNGRIKFSEQRKIDTEGIDQ
WASGEGGVHVLVVLLVMAIMVEGMDIWVGDVATLTQITNCDTTVRFAFSA
NT seq 1953 nt   +upstreamnt  +downstreamnt
atggcttctgcggcggcgccggagtcgtacatcgggagcgtgataagcctcacgtccaag
agcgagatccggtacgagggcatcctctacaccatcaacaccgaggagtccagcatcggg
ctcaggaacgttcgctcattaggaactgaaggtcgtaagaaggatggccaacagattcct
gccagtgacaagatatatgagtacatactctttcgaggaagtgatataaaggatttgcat
gttaaatcctctccaccagctcagcctgcaactttgctcaatgatcctgcaattattcag
tcacactatcctcgtcctgcctcattgtctacaagcttgccttccgccgcaagcacaaca
gcagctaatcctacttcacacaatgctctgtctggaattcagatgccaccaccatttcaa
gggaattttcccccatatcagcctggggccagcttacagtcatggaactcatcacctatg
ccatcatcagcaaatgacaccggccttacaatgccaccaatgttctggccgggatattat
gcaccgccaagtgggtttcctcatttgcagccaccaccctttcttcggccaccgcatggt
ttgacggttccacaggccctgcagcctcctgtacagtatcctggacttaatgaatcttta
ctagttgggtttccaagtatgccagagcttccttcttttcttcaacctggtaatagtaat
agtctaagtcaatcttcaggtgcatccacatcagtgccagcgcctgcttcatcgagtaca
tcaggaagccaactgccaaataagttatcatctgtttctgcttctgtgttctccatgggt
ttaactcccccatctgcgagtccttcgatttctacagttgaacgcaccatgcccctgtcc
caaggcacttcttctctagtgaacagtaagccagttgctctaccttactccagccttcta
tctctatccagtgataagcctgttagtgtacctgcttctataccaacctatctaccttcc
tctcagccaccatctgctaatgttgggcctacagtaaatgttgtggaaccagttacattg
gtaattcctggccaacttctgccaactacttcctctatggtcatttcatctcatgccttg
caaactgcttctgctatggtgccatcctctaaggccgcctcttctacggttccatcctct
caggcaacctcctctgtggttccatcctctcaggctacttcggctatagtttcaccctca
caggttgcttcctcttctgttctgtcgtcgcaacagttggaggtgagcagagaaaataaa
gatgccaagcagcgtgaatggaaggcaaaacaacccgcggttgctcaatctgaaaataat
gagccccaattgccaacaccaaagcccgtacatcagaagcctgttggagcttccttgtat
gttcagtacaacaatcgaggccgaggaagagttcagggtagaggaaatgggcaatcacgt
cccataaccaagttcacagaggactttgatttcacggcaatgaatgagaagttcaacaaa
gatgaagtatggggccatcttggtaaaagcaagagactgttgaatgatgaacgaaatgat
tatgaagatgatgtgctagaagatgatgatatatctcctagaaagctggaagctaagcct
gtgtatgtcaaagatgacttctttgattcactctcgtgcaacacaattaacaatggaggg
aggaatggaagaatcaaattctccgagcaaagaaaaatagacaccgagggcatcgaccaa
tgggcatccggggagggaggggtccacgtgttggtggtcctcctggtcatggctattatg
gtagagggtatggatatatgggtaggggacgtggctactcttacccaaatcaccaattgt
gatacaactgttagatttgctttcagtgcctag

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