Phragmites australis (common reed): 133926935
Help
Entry
133926935 CDS
T10575
Name
(RefSeq) protein RMD5 homolog
KO
K23333
E3 ubiquitin-protein transferase RMND5 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133926935
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133926935
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
CTLH complex
133926935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTLH
zf-RING_UBOX
zf-RING_2
Rtf2
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
133926935
NCBI-ProteinID:
XP_062229098
LinkDB
All DBs
Position
8:complement(28953503..28956454)
Genome browser
AA seq
386 aa
AA seq
DB search
MEIDGVREAFDRVVGKCVLSSVKAQEAVDQIVNEVEQAITKMQMMNTDSMGTVDPSSILA
ELKAKLNAIAPLNQLEGCQKELNVALSKYLKFLEKSFNPDISKAYRNVDFEVQTINNIIA
NHFYRQGLFDLGDLFIRDCGESDGAFLKLPFQEMYAILEAMKVRNLEPALSWAANNHDQL
LHNGSMLEFKLHRFQFIEIINKGIRDECFVYARTHLVPFASVHKEEFQKLMACLLWVGRL
DQSPYADLMSSGHWEKLAEELTHQFCSLLGQSSESPLSIAVSAGFQGLPTLLKLTTVMAA
KKQEWQAMKQLPVPIDIGPEFQYHSVFVCPVLREQSSDENPPMWMPCGHVVSKQSIMKLS
KSSSRPFKCPYCPSEAVASHCKQLYF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggagattgatggcgtaagagaggcatttgatcgagttgttgggaaatgtgtgttatct
tctgttaaagctcaggaagctgttgatcagatagtgaatgaagttgagcaggcaatcact
aagatgcagatgatgaacacagattctatgggaaccgttgacccctcttccatccttgca
gaactgaaagctaagctgaatgcaatagcgccactaaaccaacttgaaggttgccagaag
gaattaaatgttgccctgagcaaatatctcaagttccttgagaagtctttcaatccagat
atatcgaaggcatacagaaatgtggattttgaggtccaaacaataaacaacatcatagcg
aaccatttctaccgccaaggcctctttgatcttggtgacttgtttatccgtgattgcggg
gaatcagatggagctttcttgaagttaccatttcaggagatgtatgcaatacttgaagcg
atgaaagtgagaaaccttgaacctgccctcagttgggctgccaataaccatgaccaactg
ttgcataatggttctatgcttgagttcaagcttcatcggtttcagtttattgagataata
aataaaggaattagagatgagtgttttgtgtatgcaaggactcacttggtcccctttgca
tctgtgcacaaggaagaattccagaagctaatggcttgccttctctgggttggccggctc
gatcaatccccatatgctgacttaatgtcatcagggcattgggagaagctagctgaggag
ctcacccatcaattctgcagccttttggggcagtctagtgagagcccactgagcattgca
gtatcagctggttttcaaggactaccaaccttactgaagctgacgacagtcatggccgca
aagaagcaggaatggcaagcgatgaagcagctcccagttcccatagacatcgggccggag
ttccagtaccactctgtctttgtatgcccagtgctcagggaacagtctagcgacgagaac
cctccaatgtggatgccttgcgggcacgtcgtctcgaagcagtcaatcatgaagctgtcg
aagagcagctccaggcctttcaagtgcccgtactgcccctcggaggctgttgcgtcccat
tgcaagcagctatatttctaa
DBGET
integrated database retrieval system
