KEGG   Phragmites australis (common reed): 133926943
Entry
133926943         CDS       T10575                                 
Name
(RefSeq) coatomer subunit beta'-2-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
paua  Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:paua00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133926943
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133926943
Membrane trafficking [BR:paua04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    133926943
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   133926943
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st EIF3I Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_HPS5 PEP5_VPS11_N NBCH_WD40 Beta-prop_DCAF4 Beta-prop_SPT8 WD40_RFWD3 Clathrin TPR_GEMI5 Beta-prop_WDR75_2nd TPR_1 Beta-prop_WDR35_TULP_N TPR_8 WD_LRWD1
Other DBs
NCBI-GeneID: 133926943
NCBI-ProteinID: XP_062229104
LinkDB
Position
8:29265281..29286475
AA seq 906 aa
MPLRLEIKRKLAQRSERVKSVDLHPTEPWIMSSLYSGSVCIWNYQTQTMVKSFEVSELPV
RSSKFIARKQWVVAGADDMFIRVYNYNTMDKVKVFEAHTDYIRCVAVHPTLPYVLSSSDD
MLIKLWDWDKGWMCTHIFEGHSHYVMQVTFNPKDTNTFASASLDRTVKIWSLGSPDPNFT
LDGHSKGVNCVDYFTGGDRPYLITGSDDQTAKVWDYQTKSCVQTLEGHAHNVSAVCFHPE
LPIIMTGSEDGTVRLWHSTTYRLENTLNYGLERVWALGYMKGSRRVVIGYDEGTIMIKIG
REEPVASMDSSGKIIWAKHNEIQTVNIKAVGADTEIADGERLPLAVKELGSCDLYPQSLR
HNPNGRFVVVCGDGEYIIYTALAWRNRSFGSALEIVWSIDGEYAVRESTSKIKFYSKNFQ
ERKSIRPTFSAERIYGGVLLAMCTNDFICFYDWAECRLIRRIDVIVKKLYWADSGDLVTI
ASDSSFYILKYNRDLVSSHLDGGGSVGEEGVEDAFELLHEINERVRTGLWVGDCFIYNNS
SWRLNYCVGGEVTTMFHLDRPMYLLGYLANQSRVYLIDKEFNVVGYSLLLSLIEYKTLVM
RGDLERANSVLPSIRKEQHNSVAHFLESRGMLEEALEIATDPNYRFDLAVQLGSLEVAKE
IAVEARSESKWKQLGELAMSTGKLEMAEDCLLQATDLSGLLLLYSSLGDAEGITKLASMA
KEKGKNNVAFLCLFMLGKLEECLQLLVDSNRIPEAALMARSYLPSKVSDIVSAWKKDLQK
VNSNAAESLADPAEYPNLFEDWQIALNVEATLAPKRGIYPPAEEYITYTERSNESLVEAF
KSMNVQEEVPSENGDPAHEVIEDDGVEESQEDAVEVEADDSTDGVLVNGNDGEEHWGMNN
EGTSSA
NT seq 2721 nt   +upstreamnt  +downstreamnt
atgccgctccgcttagagattaagaggaagctcgcacagaggtcggagagggtcaagtcc
gtggatttgcatcccacggaaccatggatcatgtcaagtctttattctggcagcgtctgc
atctggaactaccaaacacagacaatggtgaaatcatttgaagtcagtgagttaccagtt
cgttcttctaaattcattgcacggaagcaatgggttgtggctggtgctgatgacatgttt
atccgtgtgtataactataatacaatggataaggtcaaggtgttcgaagctcacactgat
tacatcaggtgtgtggctgttcacccaaccctgccttatgtgttgtcatcgtcagatgac
atgctgataaaactttgggactgggataagggctggatgtgtacccacatctttgagggg
cactctcactatgtcatgcaagtcacctttaacccaaaggacacaaatacttttgccagt
gcttctcttgatcgtactgtaaagatctggagtcttggttctcctgatccgaacttcaca
ttggatggtcattcaaaaggcgtgaactgtgtcgattacttcactggtggtgatcggcca
tatctaattacaggctctgatgatcaaactgcgaaggtttgggattaccaaacaaagagc
tgtgttcagacacttgaaggccatgcccataatgtgtctgctgtatgtttccatcccgag
cttccaataataatgacaggttcagaggacggaactgttcgcctatggcactccactacc
tacaggctcgagaacacacttaactatggccttgaaagagtttgggcattaggttatatg
aagggctccagaagagttgtgattggatatgatgaaggaacaataatgataaagattggc
cgtgaagaacctgttgctagcatggatagcagtggcaaaatcatatgggcgaagcacaat
gaaattcaaactgttaatatcaaggcagttggtgcagacactgagatcgcagatggagaa
cgtttaccactggctgtgaaggagctaggaagttgtgatctttacccacaaagtttacgg
cacaatccaaatgggagatttgttgttgtatgtggagatggagagtatataatctacaca
gcgctggcatggagaaatagatcctttgggtctgctcttgaaattgtctggtcaattgac
ggagaatatgctgtcagggaaagcacgtcaaaaattaagttctacagtaaaaattttcag
gagaggaaaagtataagacccacattctctgcagaacgtatatatgggggagtattgctt
gctatgtgtacgaatgacttcatttgcttctatgactgggcagagtgcaggttgatacgc
cgaattgatgtgattgtaaaaaaactatattgggctgacagtggcgatttggtaacaata
gcaagtgattcatcattctacattttgaagtacaatagggatttagtttcttctcatcta
gatggagggggctcagttggtgaggaaggtgtggaagatgcctttgaattgcttcatgag
ataaatgagcgtgtccgtaccgggttatgggtcggagattgttttatatacaataattct
tcatggcggctaaattactgtgtgggaggagaggttactacaatgtttcacttggatcgg
ccgatgtatttgttaggatatcttgctaaccaaagtcgtgtctatcttatcgacaaggag
ttcaatgtggtgggttatagtttactactcagtttgattgagtacaaaacactcgtgatg
cgtggagatttggaacgtgcaaattctgttttaccatcaatacgaaaggaacaacacaac
agtgtggcacatttccttgaatcacgtggcatgttagaggaagcccttgaaatagcaact
gaccctaattacagatttgacctagctgtgcagcttggtagtctggaagttgcaaaggaa
attgctgttgaggcgcgaagtgagtcgaagtggaagcagttgggtgaactagctatgtcc
actggaaagctcgagatggcagaggactgtctgcttcaagctacagaccttagcggcttg
ctgcttctatattcatctcttggagatgctgaagggatcacgaaactagcatccatggct
aaagagaaaggaaagaacaatgttgcttttctttgcttgtttatgctaggcaaattggaa
gaatgccttcaattgttggttgatagcaaccgtattccggaagcagcattgatggcacga
tcctatctaccaagcaaagtttctgatattgtatcagcatggaaaaaggaccttcaaaag
gtgaactccaatgctgcagaatctctggcagatcctgctgagtacccaaacctgtttgaa
gactggcaaattgctctcaatgtagaagctacccttgctcccaaaaggggtatctatcca
cctgctgaggaatacataacttacacggagaggtccaatgaaagccttgtggaagctttc
aaaagtatgaatgtacaagaagaggtaccaagtgagaatggagatcctgctcatgaggtt
attgaggatgatggagttgaggaaagtcaagaggatgccgttgaagttgaagccgatgat
tcaacagatggtgttcttgtgaatgggaatgatggtgaggaacactggggtatgaacaat
gaaggaacttcatcagcataa

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