Phragmites australis (common reed): 133926954
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Entry
133926954 CDS
T10575
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133926954
03036 Chromosome and associated proteins [BR:
paua03036
]
133926954
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133926954
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133926954
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133926954
microRNA pathway
RISC loading complex
133926954
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
133926954
NCBI-ProteinID:
XP_062229123
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All DBs
Position
8:29541627..29555005
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AA seq
959 aa
AA seq
DB search
MLEVLDMPPPTPSRHQLGAAAKGGHGHGHAGAAAAGRKQPLQSSVAQPKAETAASAAVVP
PDGGKRCGGGGGRRCGGRGRARVAGEPRAAPLVIGPPVPSKGLSFCRRPGFGTVGARCVV
KANHFLAELPDKDLTQYDVKITPEVSSRTVNRAIVAELVRLYRASDLGMRLPAYDGRKNL
YTAGTLPFDAREFVVRLTDDDDGTGVASREREYRVTIKFAARADLHHLREFIAGRQADAP
QEALQVLDIVLRELGNKRYVAIGRSFYSPDIRKPQRLGDGLQSWCGFYQSIRPTQMGLSL
NIDMSSTAFIEPLPVIEFVAQILGKDVLSRPLSDANRIKIKKALRGVKVEVTHRGNVRRK
YRISGLTTQPTHELIFPIDDQMNMKSVVEYFKEMYGFTIQHPHLPCLQVGNQKKANYLPM
EACKIVEGQRYTKRLNDKQITSLLKVTCQRPREREMDILQTVHQNGYEQDPYAKEFGINI
SEKLTSVEARILPAPWLKYHDTGKEKECLPQVGQWNMVNKKVINGCKVNHWACINFSRSV
PEATARGFCQELAQMCQISGMEFNNEPVIPIYSARPDQVVKALKHVYNIALNRLKGKELE
LLLVILPDNNGPLYGDIKRICETDLGLISQCCLTKHVFKISKQYLANVSLKINVKMGGRN
TVLLDALSWRIPLVSDIPTIIFGADVTHPETGEDLSPSIAAVVASQDWPEVTKYAGLVCA
QAHRQELIQDLYKTWHDPQRGTVTGGMIRELLISFRKATGQKPLRIIFYRDGVSEGQFYQ
VLLYELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHKDRSSTDKSGNILPGTVV
DSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADEMQTLTNNLCYTYARCTRS
VSVVPPAYYAHLAAFRARFYMEPELLENQTSKSSNGTNGTSVKPLPAVKEKVKRVMFYC
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaggtcctggacatgccgccaccaacgccgtcgcggcaccagctgggggccgcc
gccaagggcgggcacgggcacgggcacgcaggggcggcggcggcggggaggaagcaaccg
ctgcagagcagcgtggcgcagcccaaggcggagacagcggcgtctgcggcggtcgtgccg
ccggatggagggaagaggtgtggtggaggaggagggaggcggtgcggcggccgcggccgg
gccagggtggcgggggagccgcgggcggcgcccttggtcattggaccaccggtgccgagc
aaggggctgtcgttctgccggcggccggggttcgggacggtgggcgcgcgctgcgtcgtg
aaggccaaccacttcctcgccgagctccccgacaaggacctcacccagtacgacgtcaag
atcacgccggaggtgagctcgcggaccgtgaaccgggccatcgtagcggagctcgtccgc
ctctaccgcgcgtccgacctgggaatgcgcctaccggcctacgacggccgcaagaacctc
tacaccgccgggaccctcccgttcgacgcccgcgagttcgtcgtgcgcctcaccgacgac
gacgacggcaccggcgtggcctcacgggagagggagtacagggtcaccatcaagttcgcc
gcgcgcgccgacctccaccacctccgagagttcatcgccgggcggcaggcggacgcgccg
caggaggccctccaggtactcgacatcgtgctccgggagctcggcaacaagaggtacgtc
gccatagggcggtccttctactcgccggacatcaggaaaccgcaacggctcggcgacggc
ctgcagtcgtggtgtgggttttaccagagcatccggccgactcagatgggactgtcgctc
aacattgacatgtcgtccacggcgtttatcgagccgctgccggtgatcgagttcgtggcc
caaatattagggaaggatgtcctgtcaaggccattgtcggatgcaaaccgaatcaagatc
aagaaggcactgcgaggcgtaaaagttgaagtcactcaccgaggaaatgtaaggcggaag
tatcgcatttcagggctgacaacacaaccaactcatgaactgatttttccaattgatgat
caaatgaatatgaaatccgtcgtggagtacttcaaggaaatgtatgggtttaccattcag
catccccaccttccatgccttcaagtgggaaaccaaaagaaagcaaactatctaccaatg
gaggcctgcaagattgttgagggccagagatatacaaagaggctgaatgataaacagata
acgtcattgctaaaggttacatgccaaaggcctagagaacgggagatggatattctacag
acagttcatcaaaatggatacgagcaagatccgtacgcaaaggaatttgggatcaacatt
agtgagaagctgacctctgttgaagcccgaatccttcctgcaccttggttaaaataccat
gatactggaaaagagaaggagtgcttaccacaggttggtcaatggaacatggtaaacaag
aaagtgatcaatggatgcaaggtgaaccattgggcttgtataaacttttcaaggagtgtc
ccagaagccactgctcggggattttgccaagagttggcgcaaatgtgccagatttcgggc
atggaatttaacaatgagcctgtgataccaatatattcagctagaccagatcaagtggtg
aaggcacttaaacatgtgtacaacatagcactgaacagactcaagggtaaagaacttgaa
cttcttttggttatcctccccgacaacaatggtccattatatggtgacataaaacgtatc
tgtgaaactgatttgggattgatatcacaatgttgcttgaccaagcatgtttttaagatc
agcaagcagtacttggcaaatgtctcacttaaaattaatgtcaagatgggaggaagaaac
accgtgctcttggacgcgttaagttggaggattccattggtcagtgacataccaaccatt
atatttggtgcagatgtaacacatcctgaaaccggggaggacttaagtccatcaattgct
gccgttgttgcttctcaagactggccagaagttacaaagtatgctgggctggtttgtgct
caggctcatcggcaagaactcattcaggacctttacaagacatggcacgatcctcagaga
ggcactgtgacaggaggcatgatcagggagctcttaatatccttcaggaaggccactggg
cagaagccattgagaataattttctacagggatggtgtcagtgaaggtcagttctaccaa
gtgctcctttatgagttagatgctatccgtaaggcatgtgcatccctagaaccaaattac
cagcctcctgtaacatttgtggtggttcaaaagcgtcatcatacaagactatttgcaaac
aatcataaagacagaagtagcacggacaagagtggaaatattttgccaggaaccgttgtt
gattcgaagatatgtcatccaacggagtttgatttctacctttgtagtcatgctggaatt
cagggaacaagtagacctgctcactaccatgtcctctgggatgagaacaatttcactgca
gacgagatgcagacattgacaaacaatctttgctacacttacgcacggtgcacacgctcg
gtttctgttgtcccgcctgcatactatgcgcacctggctgcatttcgagctcggttctac
atggaaccagagttgttggagaatcagacatcgaagagctccaacggcacgaatggaacc
tcggtgaagcctctgcccgctgtgaaggagaaggtgaagagggtgatgttctactgctga
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