Phragmites australis (common reed): 133927004
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Entry
133927004 CDS
T10575
Name
(RefSeq) 26S proteasome regulatory subunit S10B homolog B-like
KO
K03064
26S proteasome regulatory subunit T4
Organism
paua Phragmites australis (common reed)
Pathway
paua03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
133927004
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
paua03051
]
133927004
Proteasome [BR:
paua03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
133927004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
AAA_5
RuvB_N
AAA_2
AAA_22
PRS7_OB
nSTAND3
DUF815
Prot_ATP_ID_OB_N
AAA_14
AAA_7
TIP49
Parvo_NS1
AAA_33
RNA_helicase
Mg_chelatase
AAA_28
AAA_3
AAA_18
AAA_24
IstB_IS21
NPHP3_N
TsaE
Sigma54_activat
NACHT
bpMoxR
ATPase
ATPase_2
AAA_lid_PRS2_C
ABC_tran
eIF-1a
DUF5906
ResIII
PhoH
Csa3_N
AAA_11
Motif
Other DBs
NCBI-GeneID:
133927004
NCBI-ProteinID:
XP_062229203
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All DBs
Position
8:30309671..30314131
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AA seq
401 aa
AA seq
DB search
MAEGGEDAATAGRRAAVTDHRKKLLSCRELETRVKTGRENLANAKKDYGKTEDDLKSFQS
VGQIIGEVLRPLDNERFIVKASSGPRYVVGCRSKVDKEKLTAGTRVVLDMTTLTIMRTLP
REVDPVVYNMLHEDPGNISYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLL
YGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQPCIIFM
DEIDAIGGRRFSEGTSADREIQRTLMELLNQLDGFEELGKVKMIMATNRPDVLDPALLRP
GRLDRKIEIPLPNEQARMEVLKIHAAGIAKHGEIDYEAVVKLAEGFNGADLRNVCTEAGM
AAIRAERDYVIHEDFMKAVRKLNDAKKLESSAHYSADFGKE
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atggccgagggcggggaggacgcagccaccgcgggccgccgcgccgcggttaccgaccac
cgcaagaagctcctcagctgccgggagctcgagacgagggttaagacagggagggagaac
ctggcaaatgcaaagaaagactatggaaaaactgaagatgatctcaaatcgttccaaagt
gtgggccaaatcattggcgaggtgctccggcctctggacaatgaacgatttatcgtcaag
gccagtagtggaccacgctatgttgttggctgccgaagcaaagttgacaaagaaaagttg
acagctggtacacgagttgttcttgacatgacaacgcttaccatcatgcgcactctgcca
cgagaggttgaccctgtggtttataacatgctacatgaagatccaggcaacattagttac
tcagctgtaggtggattgtcggatcaaataagggaactcagagaatccattgagctaccg
cttatgaatccagaattgtttctccgtgtcgggattaagcctccgaagggcgtactactc
tacggtccacctggaactgggaagacactgctagctagagccatcgctagcaatattgat
gctaattttttgaaggttgtgtcaagcgcgatcattgacaagtatattggtgaaagtgca
cgcttaattcgtgaaatgtttaactatgcacgtgagcatcagccatgcattatcttcatg
gatgaaatcgatgctatcggtggccgaagatttagcgagggcactagtgcggatcgtgag
attcaaaggacattgatggagcttctaaatcagttagatggtttcgaagagcttgggaag
gtgaaaatgatcatggcaacaaaccggcctgacgttttggatcctgcactcctccggcct
gggcggttggacaggaagatagagatcccgctgccgaacgagcaggcgaggatggaggtc
ctcaaaattcatgcagctggtattgccaaacatggcgaaattgattacgaagctgtcgtg
aaactggctgaaggctttaatggtgccgatctgcgcaacgtctgcactgaagctggtatg
gccgccattcgagcggagcgtgactacgtcattcacgaggacttcatgaaggcggtgcgc
aagctgaacgacgccaagaagctcgagtctagcgcgcactacagcgcagactttggcaag
gagtga
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