Phragmites australis (common reed): 133927008
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Entry
133927008 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RGLG2-like
KO
K16280
E3 ubiquitin-protein ligase RGLG [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133927008
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133927008
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133927008
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Copine
zf-C3HC4_3
zf-C3HC4_2
vWA-TerF-like
TerY_C
zf-RING_2
zf-C3HC4
Prok-RING_4
zf-RING_UBOX
Sina_RING
Motif
Other DBs
NCBI-GeneID:
133927008
NCBI-ProteinID:
XP_062229213
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Position
8:complement(30371386..30376240)
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AA seq
443 aa
AA seq
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MGQKDSKPSYNYSYDSGNTWSGYDSRYAGNTSSSYSARYAPSSENNVQPETHARLHRKYS
RIGDDYRSLSQVTEALAQAGLESSNLIVGIDFTKSNEWTGKISFNRRCLHDIGSTPNPYE
QAISIIGRTLSAFDEDNLIPCFGFGDASTHDQEVFSFYPENRPCNGFEEALERYREIVPT
LRLAGPTSFAPMIETAIGIVDSTGGQYHVLLIIADGQVTRSVDTQSGQLSPQERDTIDAI
VKASHFPLSIVLVGVGDGPWDMMHQFDDNIPARSFDNFQFVNFTEIMSKSIADDRKEAEF
ALSALMEIPTQYKATLDLQLLGRRQRIPPRIALPPPTRTAYSRSTSFSQQSGVYSRSSSF
DQQTSGFQQRSESFKQQQPAATRRPDTYASESALEDRLLCPICMYKSKDLAFGCGHQTCY
ECGKDMERCPLCQQHITTRIRLY
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggggcaaaaagactccaagccttcatataactattcttatgattctgggaacacatgg
tcaggatatgattccagatatgctggaaatacatcctccagttatagtgcaaggtacgcg
ccttcttcagagaacaatgtgcagccagaaacacacgccaggttgcacaggaagtattca
aggattggtgatgactaccgctctttgagtcaggtgactgaagctttggcacaggcaggt
cttgaatcttcaaatcttattgtaggcattgattttacaaagagcaatgaatggacaggt
aaaatttcttttaatcgtcgctgtctgcatgatattggaagcactccaaacccatatgag
caagccatatctattattggaaggacactttcagcttttgatgaagataatttgattccc
tgctttggatttggtgatgcgtcaactcatgatcaggaggtattcagcttttacccagag
aaccgcccatgcaacggatttgaagaggcgctagaaagatacagagaaatagttccaact
cttcgattagctggaccaacatctttcgctccaatgattgagacagcaattggaattgta
gacagcactggtggccaatatcatgttcttctgataattgctgatggacaggttacccga
agtgttgatacacagtctgggcaattaagtccacaggagcgggatacaattgatgcaata
gtaaaagctagccactttcctttatctattgttcttgttggggttggtgatggaccatgg
gatatgatgcaccagtttgatgacaatatacctgctcgctcatttgacaatttccagttt
gtaaattttacggagattatgtcaaagagcatagcagatgatagaaaggaggcagaattt
gcattgtcagcactgatggaaatccctacacagtacaaagcaacacttgatctacaactc
ttaggccgccgccaaagaatacctccaagaattgctctgccaccaccaacaaggactgct
tattcacggtctactagctttagtcaacagtctggtgtttattcacgatctagtagcttt
gaccaacaaacaagtggctttcagcaacggtctgagagcttcaaacagcaacagcctgca
gccacaaggagacctgacacctatgcatcagaaagtgctttagaggacagacttctgtgc
cccatttgcatgtataaatcgaaggacctcgcgtttggatgtggacatcagacttgctac
gaatgcggaaaagatatggaacgctgccctctatgccagcagcacataaccacaaggatc
aggctctactga
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