Phragmites australis (common reed): 133927086
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Entry
133927086 CDS
T10575
Name
(RefSeq) probable E3 ubiquitin ligase SUD1
KO
K10661
E3 ubiquitin-protein ligase MARCH6 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133927086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133927086
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133927086
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
March proteins
133927086
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MARCHF6_C
RINGv
zf-RING_2
OCC1
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
133927086
NCBI-ProteinID:
XP_062229358
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All DBs
Position
8:complement(32094736..32102225)
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AA seq
1086 aa
AA seq
DB search
MAEIADRAVAGDLPEEARPPAAGAEEEEEDEEEEGDVCRICRNRGEDDHPLRYPCACSGS
IKFVHQDCLLQWLDHSNSRQCEVCKHAFSFSPVYADDAPTRLPFQELIVGVGMKACHVFQ
FILRLAFVLSVWLMIIPFITYWIWRLTFVRSLGEAQRLFLSHISAQLILSDCLHGFLLSA
IIVLIFLGATSLRDYIRHLRELGGHDAERDDGGRERHGARAVRRLAGPNNRVPADGNIDE
LAEAQGIGAGELLRRNAENVAARLERLEAQVEQMLDGLDDADGAEDVPFDELVGMQGPVF
HLVENAITVLASNAIFLIVVIFVPFSLGRIVLYYLSWFFSSASSPMLAKVMPFTETAISL
ANDTITTAINAVKNFSSDSRNEGVIGHVIEVVTQSLKINATSLNVIQGTGRNSLIKGTTI
GSSYLSDLTTLAVGYMFIFCLVFLYIGSLALLRYARGERFTIGRLYGIATISEAIPSLCR
QFFAGMKHLLTMVKVAFLLVIELGVFPLMCGWWLDVCTLKMLGSTIAQRVEFFTMSPLAS
SSIHWLVGIVYMLQISIFVSLLRGVLRNGVLYFLRDPADPNYNPFRDLIDDPVHKHARRV
LLSVAVYGSLIVMLVFLPVKLAMRVAPSIFPLDITIFDPFTEIPVDVLLFQICIPFAIEH
FKPRATIKALLHHWFAAVGWALCLTDFLLPKPEENGGQENWNGRAERRDRVHGGQEMVAQ
QVEQRMIQHVAAEDNGRGNANEANDVAEESDVDDQGDSEYGFVLRIVLLLVLAWMTLLIF
NAGMIVIPISLGRLVFEAVPRLPITHGIKCNDLFSFSIGCYIIWSAAAGIRYAINYIRSG
QLGFLVQQICKWCSIVLKSSALLSIWIFVIPVLIGLLFELLVIVPMRVPIDESPVFLLYQ
DWALGLIFLKIWTRLVMLDQMAPLVDENWRAKFERVRDDGFSRLRGLWVLHEIILPIVSK
LLTALCVPYVLARGVFPALGYPLIVNSAVYRFAWLGCLIFSALFFCAKRFHLWFTNLHNS
IRDDRYLIGRRLHNFGEDTPQPIESGATSGPDDQDQALILRDREGELGLRMRRNNLRANQ
QLRLAA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggcggagattgccgaccgggccgtcgctggcgatctgccggaggaggcgcggccgccc
gccgcgggggcggaggaggaggaagaggacgaggaggaggagggggacgtgtgccggatc
tgccgcaaccgcggtgaagacgaccacccgctccggtacccatgcgcctgcagcggcagc
atcaagttcgtgcaccaagactgcctcctccagtggctcgaccacagcaactcgcgccag
tgcgaggtttgtaaacatgcattctccttctcacccgtgtacgctgatgatgctccaaca
agacttcctttccaagaactcattgttggcgttggaatgaaagcatgccatgtgtttcaa
ttcatcctccggcttgcctttgttctctcagtttggctcatgattatcccattcattacc
tattggatatggcggttaacatttgtgagaagtctcggcgaagcgcaaaggttgttcttg
agtcacatcagtgctcagttgatccttagtgattgcctacatgggtttcttctctcagct
atcattgtccttatatttcttggagccacctcgttacgggactatataaggcacttgcgg
gaacttggtggacacgatgctgagagggatgatggaggccgtgaaaggcatggtgctcgg
gctgtcagaaggctagctggtcctaataacagggttcctgccgatgggaatattgatgaa
ttagcagaagcccaaggaatcggtgctggtgaacttctgaggagaaatgccgaaaatgtt
gctgctcgattagaacgacttgaagcccaagttgagcagatgcttgatggtctggatgat
gcagatggtgcggaggatgttccttttgacgaactcgttggcatgcaaggccctgtcttc
cacttggttgagaacgcaataacagttttggccagcaatgctatattcctcattgttgta
atctttgttccattctcattgggaaggattgtcctgtactatctatcatggtttttctca
tcggcctctagtcctatgctggcgaaagtgatgcccttcacagaaactgctatttcattg
gctaatgatacaattacgactgcgattaatgctgtgaaaaacttctcctccgacagtcgc
aatgaaggtgttattgggcatgtgattgaggttgttactcaatccttgaagataaatgct
actagtcttaatgtaattcaaggcactgggaggaatagtctgataaagggaacaactatc
ggctcatcttatctctccgacctgacaactcttgctgttggatacatgtttatcttttgc
cttgtatttctgtacatcggatcgctggctttacttcgatatgccaggggagaacgtttt
accattggaagactctatggtatagctactatatcagaggccatcccatctctatgcagg
cagttcttcgctggaatgaagcatctcttgactatggtcaaagttgcattccttttggtg
attgagctcggtgtatttcctcttatgtgtggttggtggcttgatgtctgcactctaaag
atgctgggttcaacaattgctcaaagagttgaattctttacaatgtcacctttggcgagc
tcctctatccattggcttgttgggattgtatatatgctccaaataagcatatttgttagt
cttcttcgaggggtactgcgcaatggggttctttattttctgcgggaccctgctgatcca
aattacaatccgtttagggacttgattgatgatcctgtgcataaacatgctcgacgagtt
cttttatcagttgcagtgtatggaagcttgattgtgatgctggtcttcttacctgtaaag
ctggccatgcgagtagctccttcaatttttcctctggacatcaccatttttgacccgttt
acagagattccggttgacgtgcttctgttccaaatatgcatcccatttgcgattgagcat
ttcaagcctcgtgcaacaattaaagcccttttgcatcattggtttgctgcggttggttgg
gccctgtgcttaaccgatttcttactgccaaaacctgaagaaaacggtgggcaagaaaat
tggaacggcagggcagaaagaagagacagggtacatggtgggcaggaaatggttgcccaa
caggttgaacaacgcatgatacaacatgttgctgcagaagataatggcaggggaaatgca
aatgaagccaatgacgtcgctgaagaatctgatgtggatgatcagggagactctgaatac
ggctttgtgcttcggattgtgctcttgcttgtattggcatggatgacactattaatattc
aatgctggaatgattgttattcctatctcgcttggccgtcttgtttttgaggctgttccc
cgcctgccaatcacacatggcatcaagtgcaatgatctgttctcttttagcattgggtgt
tatattatctggagcgcagcagctgggatcagatatgcaattaattacattagatcagga
cagctgggcttcctggtacaacagatctgcaagtggtgctctattgttttgaagagctct
gctctcctgtcaatatggatcttcgttattccagtgttgattggactcctgtttgagcta
ctggtcattgtacccatgagggtgcctatcgatgagagccccgtttttctactgtaccag
gattgggcacttgggttaatattcttgaaaatatggactagactggttatgctggatcaa
atggcacctttggttgatgaaaactggagggcgaagtttgagagagtaagagatgatggc
ttctcccgtttgaggggtctgtgggttctgcatgaaattatattgccgattgtcagcaag
ctcctcactgccctctgtgttccatacgtccttgcaaggggtgtcttcccagcgttgggc
tatccactcattgtgaactccgcagtctaccgttttgcttggctcggctgcctgatattc
agcgcactcttcttctgcgccaaaagattccatctttggtttaccaatctccacaattcc
attagggatgaccgctatctgattggccggaggctgcacaactttggtgaggatacaccc
cagccaattgaatccggagcaacttcagggccagatgaccaggatcaggcgctaatccta
cgagatcgggaaggggagctgggactgaggatgaggcgaaataacctgcgtgcgaatcaa
caactcaggctagctgcatga
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