Phragmites australis (common reed): 133927147
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Entry
133927147 CDS
T10575
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 19-like
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133927147
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133927147
Enzymes [BR:
paua01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133927147
Peptidases and inhibitors [BR:
paua01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133927147
Ubiquitin system [BR:
paua04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133927147
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
zf-MYND
MYND_ZMYND11_ZMYD8
Motif
Other DBs
NCBI-GeneID:
133927147
NCBI-ProteinID:
XP_062229439
LinkDB
All DBs
Position
8:complement(33116209..33123780)
Genome browser
AA seq
1020 aa
AA seq
DB search
MLGGSGGGGGGAGLGLDLSAVIQAAVLGLVLFSAAVVAIRRAASRYFVVDAAGFAASYDD
HHHHSSAAYPMPSQGKQEPGPAGEEAGPCAKCGGVSSKKCSGCKRVRYCSQECQTKHWQT
DHKFKCKQMKLLDPGDKLSSEGDANSKKSTGFGRISLVPARKKLNKVIFPYDGFLKLYNW
RDLDFLPCGLMNCGNSCFANVVLQCLSCTRPLVAYLLGKDHSRECSMRHEDWCFLCELQC
HIQRASESLHPFAPMNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKA
VDLSTQETTVIQHIFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFT
AVEWLDGDNKYKCDGCNDYVKARKHLSVHQAPNILTITLKRFQSGRFGKLNKRVTFPMEL
DLTPYMSSTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGCRGSWYKIDDCKVMIVDEE
EVHAQGAYMLLYSRRTARPRPLITVEELMKQQQCKAVPSNGQNHLIPEDATLNCESPSKS
SEDLLQQDSESNNESLHKMDIKDLESDLDLHISNEGNKLISNENLHLPGSPVSHVLEDTR
TPGSPLEGSTSMRSVQFGPPLEGVPTTMSSVQFGSTSEASSVHSFAEQCEESASCIDSVD
YMDIEAGAEVERRNEQRPILNDSGKTDNKASVPTFVNGMTRKPKPLFSPGFLDKPSRKRS
SFAEEGHIGGCSAGSSQKLNGHCNGHLINSEQGVLANSCGSNLSFGSEKCNGDMFATSNN
GNYHAVNGDIQSKNGSLHADKRDMPFVSHGFKPRPYREPSGSNSTSSGKPSKACQGDMSL
LHWNFLERPCSRGKSVKVDDCLPFSNGTSSSFVNGNSKSRHCRESAVISTSPSSMHGLET
SSNISMEQKSNGAAVVPDHVEEKWSSDCTTNGSSFQLRSASDDKTSDYLGENGHAILATK
NTSCGQENGSNGTPDGNGVGCQRDGAPALLVSKKILGSEHDGLRRRVTSNFFEQNGIDGQ
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgctggggggcagcggaggcggtggcggtggcgcgggcctgggactggacctctcggcg
gtgattcaggcggcggtgctcgggctcgtgctgttctcggcggccgtcgtcgccatccgc
cgcgccgcctcgcgctacttcgtcgtcgacgccgctgggttcgccgcctcctacgacgat
caccaccaccacagctcggccgcctacccgatgccgtcccaggggaagcaggagcctggg
ccagccggcgaggaggcggggccgtgcgccaagtgcggcggcgtcagctccaagaagtgc
tctggttgcaagcgcgtgcggtactgttctcaggaatgccagacaaaacattggcaaact
gatcacaaattcaagtgcaaacaaatgaaattattggatcctggtgacaagttatccagt
gaaggtgatgccaacagtaagaaatcaactggtttcggtcgcatctcattagtgcctgcc
cgcaaaaagttaaacaaggttatctttccttatgatggatttttaaaattgtacaactgg
agggaccttgattttttgccgtgtgggctcatgaattgtggcaacagttgctttgctaac
gtggttttacagtgtctctcatgcacgagaccacttgtggcctatctgttaggaaaggac
catagcagggaatgttctatgagacatgaagattggtgtttcttgtgtgagttgcaatgc
catattcaaagagctagtgaaagtttacatccatttgctcctatgaacattctttctcat
ctgccaaatattggtggcaatcttggcttcggtaggcaagaggatgctcatgaattcatg
aggtttgcaatagataagatgcaatcagcttgccttgatgaatatggaggcgaaaaggct
gttgatcttagcacccaagagacaaccgtcattcagcacatatttggtggacggcttcag
tctcaggttcaatgtacggcgtgtggaatggtctcaaaccgctatgataacatgatggac
ttgacagttgaaattcaaggtgatgctgaatcgttggaaaaatgcttggatcagttcact
gctgtagagtggcttgatggagataataagtacaaatgtgatggatgcaacgactatgtc
aaagcacggaagcatctttcggttcatcaagctccaaatatactcactatcactctcaaa
agattccagagtggtagatttgggaaactgaacaagagagttacattccctatggagtta
gatcttacaccatacatgagtagcactgatggaagtgacctgtatgatctctatgctgtt
gttgttcatctggatatgctgaatgcttcattttttggccattatatatgctacatcaaa
ggttgtcgaggaagttggtataaaattgatgactgcaaggttatgattgttgatgaggag
gaagtacatgctcaaggtgcttatatgcttctatatagcaggagaacagctcgacccagg
ccacttattacagttgaagaacttatgaaacaacagcagtgcaaagcggtcccttcaaat
ggacaaaaccatctgataccagaggatgcaacattaaactgtgaatcaccttcaaagtct
tcagaagatctgttacaacaggattctgaatccaacaatgaatctttgcataagatggat
atcaaggacctagagtcagacttggatctacatataagcaatgagggcaacaaattaatt
agcaatgaaaatctacatttgccaggttcaccagtgtcacatgttcttgaagacactaga
actccaggttctccattagaagggtctacttccatgagatctgtgcaatttggccctcca
ttagaaggtgtccctactaccatgagctctgtgcaatttggctccacgagtgaagcatct
tcagttcattcctttgcagagcaatgtgaggagtctgcctcatgtattgattcagttgac
tacatggacattgaagccggcgctgaagttgagagacggaatgagcaacgacccatctta
aatgattctggaaagacggacaataaagcatcagtcccaaccttcgtgaatgggatgaca
agaaaaccaaaaccactattttctcccggtttccttgataagccctcaagaaagaggtct
tcttttgcagaagaggggcacattggtggttgtagtgctggttcctctcaaaagttaaat
ggccattgcaacggacatctcatcaactcagagcaaggagttctcgccaactcctgtggt
agcaacttatcctttggaagtgaaaagtgcaacggagatatgtttgcgacgtccaataat
ggcaattaccatgcagtcaatggtgatatacaatctaaaaatggctcattgcatgcagac
aagcgagatatgccttttgtttctcatggtttcaagccaagaccttacagggaaccatca
ggcagcaacagtacaagcagtggtaaaccatcgaaagcttgccaaggggacatgtcatta
ttacattggaacttccttgaaaggccttgttctagaggaaaatcagtcaaagtagatgat
tgtttgccattcagtaatggcacatcatcatcctttgtgaatggcaacagtaagtcaaga
cactgtagggagtctgcagtcataagcacctctccaagctctatgcatggtctggaaaca
agctctaacatttctatggagcagaaatctaatggtgctgcagtagtgccagaccatgta
gaagaaaagtggagttcagattgcacaacaaatggctcgtcgttccaactaagatcagct
tctgatgataaaactagtgactacctcggtgaaaatggccatgcaattttggccaccaag
aatactagttgtgggcaagaaaatggcagtaatggaacccccgatgggaatggtgtgggt
tgccaaagggatggcgctcctgccctgttggtctccaagaaaatcttgggatctgaacat
gatggtttgcgccgaagagtaacctcgaatttttttgagcagaatggtattgatggccaa
taa
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