Phragmites australis (common reed): 133927617
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Entry
133927617 CDS
T10575
Name
(RefSeq) nuclear transcription factor Y subunit B-9-like
KO
K08065
nuclear transcription Y subunit beta
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
paua03000
]
133927617
Transcription factors [BR:
paua03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
133927617
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Ortholog
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
Bromo_TP
TFIID-18kDa
CCPG1_C
CENP-T_C
TFIID_20kDa
Motif
Other DBs
NCBI-GeneID:
133927617
NCBI-ProteinID:
XP_062230054
LinkDB
All DBs
Position
8:14002691..14003437
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AA seq
248 aa
AA seq
DB search
MAMHPQSPQPNAPACTLATETAVPEAAVMTEPPVSNTELVIREQDRLMPIANVVRIMRCV
LPPHAKISDDAKEVILECVSEFISFVTGEANERCHTEHRKTVTAEDIVWAMDRLGFDDYV
SPLDAYLQRMREYGGSGRGDRARPRAPRAPSVAALHGVQMHPAMHPYPAAAQAYAVRPVP
LIRGVSSVPRFGGQYQMLGGERSMAAYYGGFALFEDGGSNGGGCADEASSSNEEPPATGI
GQHPQYPN
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggccatgcatccccaaagtcctcaacccaatgctcctgcttgcaccttggcaacagag
accgctgttcccgaagcagcagtgatgactgaacctccggtgtccaacacggagctggtg
atccgggagcaggaccgcctgatgccgatcgcgaacgtggttcgcatcatgcgctgcgtg
ctccctcctcacgccaagatctcggacgacgccaaggaggtgatactggagtgtgtgtcc
gagttcatcagctttgtcaccggcgaggccaacgaacggtgccacaccgagcaccgcaag
accgtcaccgccgaggacatcgtgtgggccatggaccgcctcggcttcgacgactacgtc
tcgcccctcgacgcctacctccagcgcatgcgcgagtacgggggctcaggccgcggtgac
cgcgcacggccgagggcaccccgtgcgccgtctgtggccgcgctccacggcgtgcagatg
caccctgccatgcacccgtaccccgctgcagcgcaagcatacgccgttcggcccgttccc
ctgattcgaggcgtcagctcggtgcctcgcttcggcggccagtaccagatgctcggtggc
gagcgctccatggctgcctactacggaggattcgcgctgttcgaagacggtggaagcaac
ggaggaggctgcgccgacgaggcaagctcatcgaacgaggagccaccagcgacgggcatt
ggccagcacccgcagtacccaaactag
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