Phragmites australis (common reed): 133927641
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Entry
133927641 CDS
T10575
Name
(RefSeq) protein ESSENTIAL FOR POTEXVIRUS ACCUMULATION 1-like isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
paua03019
]
133927641
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
133927641
Surveillance factors
Other surveillance factors
133927641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
Motif
Other DBs
NCBI-GeneID:
133927641
NCBI-ProteinID:
XP_062230071
LinkDB
All DBs
Position
1:complement(53731715..53738461)
Genome browser
AA seq
1534 aa
AA seq
DB search
MAERKLDRPAALGKDGLSLGIEEDRAAAAAAMGFVDDFKDPQHLENSIPLSPQWLYAKPT
DAKISLPHGSSLEPAEKELRLLEGTVDKKERRRNVFDADSGLRWLEEERETSLLGRKERK
KEVDRDLENRKNDRRSDNVSARDNIDSRAPPTSERWSDGSTRSLGNEARRDGKWSSRWGP
DDKEKDSRSDKKIDAEKDETYAEKQTFTGRLLSESDSRDKWRPRHRQESHSVGTATYRAA
PGFGSEKGRVKDSNVGFAPGRGRGNPNLVPSFNRPSSAGPIGAPPVHGKCAKTAVTFRYP
RGKLLDIYRQKNMMASFDDAHLKLEEIPSITLSTSAKPLAFVAPNTLEEALLEDIRKGKI
ISSEAINAPGNKKERTQDPEEPACGVDDNKAKTTIAFGGLGHEGSALISEKDAFYDEGMF
SSAVSTSAPMRFIEEHARDNQSGIPGIHEGLKTDEVKSSADHDLSTKLPDDSNTLFDVPP
FEHPPESTMSYQSSDMDMKARGQVSYPEELTLYYLDPQGGVQGPFLGADIISWYEDGYFG
LELPVRLSQAPDDAPFRPLVEVMPHLGRKPQSHPPVPCDESAGSLDSVQSKFEAAIPTSA
SSGKSDQASKWDSESYAVDPKRGEQEASVQSQTSWLPSSETQKDSANIRQHIPEAVNQDA
EEVLYTGRPNSSMGQSLRDLENDRADFQLASRDPRSRVGEANLPQHDGPRESDLSPLGLL
WSELEGMHPKQPLSSNVLGVNKRRNPKPTAPKDIPAVNMRHGPLSRMNEASGVRDEWPAN
FGQLDNMNDANISGRIPQVEAEHHLNFEEQLLLQQIRREQLQQEQMMARNNLEFPGPFPG
QVFDSLHQHRQPMNQPLPDADHILRVQFELEQQRCQQLQQEQHQRQLQQQRQTQLLQQQQ
QQQQKMILEQLLQQQLQGSNFGPNNMVDQVLLREHVLNDLHHQPHHLQRQHDAAIEQLIQ
AKFGHGLHREHHNDMLDVLPRSNQRQMLPLEQQILLGLQHEQLQSQQLANALRQHSGREE
ERHLSGVWPMDDAGQFICSGTSPNQGHISRQGRFDLLDTLQRSSSFEHHEHLDRSLSLHE
RLHRGGQGIHSLERSGSLPGGGPLPNPDVINALARQHGLGQLETHGDFYSSGQMPMLASG
VHPQQHRFQEQLSGSHAGRLERHWLDANGQLQNSLMESSRINQLQIEAEKQRRNVEMNLS
VDNPHAWAALMNKERNTEQDLSDMIRNKLVLQSQQSLGFPDVPVPASFGRKDPSVHFAQP
VAENPLRSPVNRLTLEESLAERSVFTKIGESAQEGSVNLNSIENSGKYNLRSNSSSMLEQ
KHFLATDDVQRGEFSDITGGRASANQFVGSVNELTRGKKQGSSVNLAGDDTDFAEEAVRS
WSDTGISKGNSHSLLKRTTSQHTATSQAVSMDLSSTVRLKKAGLSSSDENKMESVVTSVA
KAMEASVPSSKETGAYSMQSTTTNLDASGQSFSEALKSTKKPPMQYDASESADGGPGGKG
AKKKTKKGKQIDPSLLGFKVHSNRIMMGEIVRDD
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcggagaggaagctggatcgacccgcggcgctcgggaaagatgggctgtcgcttggg
atcgaggaggacagggccgccgccgccgccgccatggggttcgtcgacgatttcaaagat
ccgcagcacctggaaaacagcattcctctgtctcctcagtggctctatgctaaaccgact
gatgcaaagatttcattgcctcatgggtcctcccttgaacctgctgaaaaggagctgagg
ctgctggaaggaactgtggataagaaagaacgcaggcggaatgtgtttgatgctgacagt
ggtcttcgttggcttgaagaggaaagagagacaagcttacttgggaggaaggagcgcaag
aaggaagtggaccgggatttggagaatcgtaaaaatgatcgccgatctgacaatgtttct
gcaagggataacattgattcacgtgcacctcctacatctgaaaggtggagtgatggttcc
acccgtagtttggggaatgaagcacggcgtgatggaaaatggtcatcaagatgggggcct
gatgacaaggagaaggactccaggtcggacaagaagattgacgcagaaaaggatgaaaca
tatgctgaaaaacagacatttacgggaaggttgctgtctgagtcggactcccgtgataaa
tggagacctcgtcaccggcaggaaagtcattctgtcgggacagctacataccgtgctgct
ccaggctttggatctgagaaaggtcgtgtaaaggactcgaatgttggttttgcccctgga
agaggcaggggaaacccaaacttagttccatccttcaaccggccatcatctgcaggacca
attggtgctccacctgtgcacggaaaatgtgcaaaaactgctgttacttttcgctaccca
agagggaagcttctggatatatacaggcaaaaaaatatgatggcatcctttgatgacgcc
caccttaaactggaggaaattccttccatcacactctctacttctgcaaaaccactagcc
tttgttgcacccaatactcttgaagaggctcttctggaagatattaggaaaggtaaaatc
attagcagcgaagcaatcaatgcgcctggaaacaaaaaagagaggacacaagatcctgaa
gaaccagcttgtggtgttgatgacaacaaggctaaaaccactattgcatttggtgggttg
ggtcacgaaggatctgctttaatctcggagaaggatgcattctatgatgaagggatgttt
tctagtgctgttagtacatctgcaccaatgagatttatagaggaacatgcccgtgataat
caatctgggattcccggcattcatgaaggtttgaaaactgatgaagtcaagtcaagtgct
gatcatgatcttagcactaagctacctgacgattcaaacactctgtttgatgtaccaccc
ttcgagcatcctccagaatccactatgtcataccaaagcagtgacatggatatgaaagct
aggggccaggttagttacccagaggagctgacgttatattatctggatccccaaggaggt
gttcaaggtccatttctgggtgctgacataatctcctggtatgaagatggatattttggt
ttggagttacctgttcgtttatctcaggctccagacgatgctcctttccgcccacttgtt
gaagtcatgccacaccttggacgaaagccccaatcacacccgcctgtaccctgtgatgaa
agtgctggatctctggattctgttcaaagtaaatttgaagctgcaatccctacttctgct
tcttctgggaagagtgatcaagcatctaaatgggactctgaaagctatgcagttgatcct
aaaagaggtgagcaggaagcatcagttcagtctcaaactagttggttaccttcatctgaa
acacaaaaggattcagcaaacattagacaacacattcctgaagcagtaaatcaggatgct
gaagaagtgttgtacactgggaggcctaatagcagcatgggtcaatccctaagggatctc
gaaaatgaccgtgcagatttccagttggcatcacgtgatccccgttctagggtgggagaa
gctaatttgcctcagcatgatggcccgagagagagtgatctgagtcctcttggcttactt
tggtctgagctggaagggatgcacccaaagcaacctctctcatcgaatgtacttggtgta
aataagcggagaaatcccaagcctacagcgcccaaggacattccagctgtaaacatgagg
catgggccacttagcaggatgaatgaagcttctggtgtgcgtgacgagtggcctgctaac
tttgggcagctggacaacatgaatgatgcaaacatttcaggccgaatccctcaggttgaa
gctgaacatcatttgaattttgaggagcaactgcttcttcaacagattcgaagggagcag
ctgcagcaggagcaaatgatggcccgtaacaatttggagtttcctggaccatttccaggg
caggtgtttgattctttgcaccaacaccgacagcctatgaatcaaccacttcctgatgcg
gatcatattttgagagtacagtttgaacttgaacaacaacgctgtcaacagctccaacaa
gagcagcaccaaaggcagctgcagcagcaacggcaaacccaacttttgcagcagcagcaa
cagcagcagcaaaagatgattctcgagcaactgttgcaacaacagctgcagggttcaaat
ttcggaccaaataacatggtcgatcaagtcttacttcgggagcatgtattgaatgacctg
catcaccaaccccaccatttgcaaaggcagcatgatgcagcaattgaacaacttattcaa
gcaaagtttgggcatggccttcatagggagcatcacaatgatatgttggatgttctccca
cgttcaaatcagaggcagatgcttcctttagagcagcaaattcttttaggtcttcagcac
gagcagcttcagtcacaacaattggctaatgctctacgacagcattcaggccgggaggaa
gaaaggcacttaagtggggtctggccaatggacgatgctggtcagtttatttgctcagga
accagtccaaatcaaggccacatttctaggcaaggtcgttttgatcttctggatactctt
cagagatcttcttccttcgaacatcatgaacatcttgaccggagcctctccttgcacgag
cgtttgcataggggaggtcaaggtattcactcccttgagcggtctggttctttgcctggt
ggtggtcctttaccaaatccagatgttataaatgccctagcacgtcagcatggccttggt
caactggaaacacatggtgatttttattcttcaggccaaatgcctatgcttgcttcaggg
gttcatccccagcaacataggtttcaggagcagctttctggttctcatgcaggaaggcta
gaaaggcactggttggatgccaatggacaattgcaaaatagtctgatggaatcttcacgc
attaaccagttgcagattgaagcagagaagcagaggaggaatgtggaaatgaacctttct
gttgacaatccgcatgcatgggcagcacttatgaacaaagagaggaacacggagcaagat
ttgagtgatatgatccgtaataaacttgtccttcaatcacagcaatctttgggatttcct
gatgttccggtgcccgcatcatttggacgtaaagatccttctgtacactttgcacagcct
gttgcagagaaccctttgagatccccagtgaacagattgactttggaggagtctcttgca
gaaaggtcagtttttacaaaaataggggagtcagcgcaggagggatcagtcaatcttaat
agtattgagaacagtgggaaatataaccttagatcaaactcttcatcgatgcttgagcag
aaacattttcttgcaacagatgatgttcaaaggggagaattttcagatattacgggtggc
agagcatctgctaatcaatttgttgggagtgtcaatgagttgaccagggggaaaaagcag
ggttctagtgtgaacttggctggagatgatactgattttgctgaagaagctgttaggagc
tggtctgatactggcatctcaaaagggaattctcactccttgctaaagcgcacaacgagc
caacatactgctacatctcaggcagtttccatggatttatcttcaactgttaggctgaag
aaggcaggcctttcatcttctgatgagaataagatggaatcagtagtcacctcagtagcc
aaggctatggaagcctctgttccgagcagcaaagagacgggggcgtatagcatgcaatca
accaccaccaatcttgatgcctctggtcagtcgttcagcgaagcgttgaagagcacaaag
aagccgcccatgcagtatgatgcctcggaatctgcagacgggggcccgggtggtaaaggt
gcgaagaagaaaacaaagaaaggaaagcagattgacccttctcttcttggcttcaaagtc
cacagtaaccggatcatgatgggtgagatcgttcgcgatgattaa
DBGET
integrated database retrieval system
