Phragmites australis (common reed): 133927938
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Entry
133927938 CDS
T10575
Name
(RefSeq) transcription initiation factor IIB-like
KO
K03124
transcription initiation factor TFIIB
Organism
paua Phragmites australis (common reed)
Pathway
paua03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133927938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133927938
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
133927938
Prokaryotic type
Archaeal type
TFB
133927938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
Ribosomal_S27e
MGH1-like_GH
Zn_ribbon_9
HTH_Tnp_ISL3
Motif
Other DBs
NCBI-GeneID:
133927938
NCBI-ProteinID:
XP_062230245
LinkDB
All DBs
Position
9:complement(33918748..33919743)
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AA seq
309 aa
AA seq
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MHSAADEMLYCPDCRRATEVVLDHATGDTICTDCALVLEAHYIDEGSEWRNFADDGGGED
RDPSRVGGPNDPFLSNAPLVTRIVFSGPLKQQGDGAALPRMRNVGGPDTERTLVEAFHAI
ADMADRLGLVATIRDRAKEVYKTLDEAKACPRGKKRDVFYAACLYVACRNEGKPRTYKEL
ASATRAGAAAKKEIGRMTMTIKKVLGEEAGKVMDIGVVRAADYLRRFCSLLGMGNQEMRV
AQEASRRLEHSLDVRRNPESIAAAIIYMVVQRAGSSKTVRDVSMATGVAEGTIKDAHKDL
TPHVGLLFG
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcacagcgccgcggacgagatgctctactgcccggactgccgccgcgcgacggaggtg
gtgctcgaccacgccaccggcgacaccatctgcaccgactgcgcgctcgtcctcgaggcg
cactacatcgacgagggctccgagtggcgcaacttcgccgacgacggcgggggcgaggac
cgtgaccctagccgcgtcggcgggcccaacgaccccttcttatccaacgccccgctcgtc
acccgcatcgtgttctccggcccgctcaagcagcagggcgatggcgccgcgctgccgagg
atgcggaacgtcggcgggccggacaccgagcggacgctggtggaggcgttccacgccatc
gccgacatggccgaccggctcggcctcgtggccaccatcagggaccgcgccaaggaggtg
tacaagacgctggacgaggccaaggcgtgcccgaggggcaagaagcgggacgtgttctac
gcggcctgcctctacgtcgcgtgccgcaacgagggcaagccgcggacgtacaaggagttg
gcctcggcgacgcgcgccggcgcggccgccaagaaggagatcggcaggatgaccatgacc
atcaagaaggtcctcggggaggaggccgggaaggtgatggacatcggcgtcgtgcgcgcc
gcggactacctgcgccgcttctgctctctgctcgggatgggcaaccaggagatgcgcgtc
gcgcaggaggcgtcgcggaggctggagcacagcctcgacgtgcgccgcaaccccgagtcc
atcgcggccgccatcatctacatggtcgtgcagcgcgccggctccagcaagaccgtccga
gacgtgtccatggccaccggcgtcgccgagggcaccatcaaggatgcgcacaaggacctc
accccgcatgtcgggctgctcttcggttag
DBGET
integrated database retrieval system
