Phragmites australis (common reed): 133928218
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Entry
133928218 CDS
T10575
Name
(RefSeq) autophagy-related protein 18a-like
KO
K22991
WD repeat-containing protein 45
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133928218
Membrane trafficking [BR:
paua04131
]
Autophagy
Other autophagy associated proteins
Others
133928218
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_Vps41
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
BCAS3_WD40
EIF3I
CPSF_A
Beta-prop_TEP1_2nd
Beta-prop_IFT80_2nd
WD40_MABP1-WDR62_1st
PEP5_VPS11_N
DUF7099
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
133928218
NCBI-ProteinID:
XP_062230430
LinkDB
All DBs
Position
1:complement(54250972..54254482)
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AA seq
434 aa
AA seq
DB search
MATPATAPAPPNPNPVPDEPLPPPQEEEEAPESPPPAPTTSIEPTPSGDEESDDSSSVSS
ASSAPAAVAAGGGGAERPFPAAKDLLHISFNQDYGCFAAGIKSGFRIYNCDPFREIFRRD
LGTAGDGDGGGGGGISVVEMLFRCNILALVGGGDNPHYPPNKVMIWDDHQSRCIGELSFR
SPVRGVRLRRDRIIVVLENKIFVYNFADLKLVHQIETAPNPKGLCVVSQQPGSIVLVCPG
AQKGQVRVEHYGARKTKFINAHTSRVACFALSQDGRLIATASTKGTLIRIFNAAEGNLLQ
EVRRGADRAEIYSLAFSNNLQYLAVSSDKGTIHVFNLKINDKPLPTPDPEIPHLSPPLSF
IKGVLPKYFHSEWSVAQFRLHEGEQYIVAFGHEKNTVTVVGMDGSFYRCQFDPVNGGEML
QLECYNFLKPSDQP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcccgccaccgcgccggccccgccaaaccctaaccccgtccccgacgagccg
ctgccaccgccgcaggaggaggaggaggcgccggagtcgccgccgcctgcccccaccacc
tcaatcgagcccaccccttcaggcgacgaggagagcgatgattcgtcgtccgtctcgtcg
gcttcctccgcccccgcggccgtcgcggcgggcggtggtggagccgagaggcctttcccc
gcggcgaaggacctcctccacatctccttcaaccaggactacggctgcttcgcggcgggc
atcaagtcgggcttccgcatctacaactgcgaccccttccgcgagatcttccgccgcgac
ctcggcaccgcgggggacggcgacgggggagggggagggggtatcagcgtcgtggaaatg
ctcttccgctgcaacatactcgcgctcgtaggcggcggcgataacccccactacccgccg
aacaaggtgatgatctgggacgaccaccagagccgctgcatcggggagctctccttccgc
tctcccgtccgtggcgtccgcctccgacgcgaccgcatcatagtggttcttgagaacaaa
atttttgtatacaacttcgcggaccttaagcttgtgcaccagattgagacggcacccaat
cctaagggcctctgcgtggtgtcgcagcagcctgggtcgatcgtgctggtttgccctggt
gcacaaaaggggcaggtcagggtggaacactatggggcaaggaagaccaagtttatcaat
gcacacacttcccgtgttgcatgctttgcattgtcgcaggatgggaggctgattgccact
gctagcaccaaggggacgctaatcagaatcttcaatgctgctgagggcaatcttctccag
gaagtaaggagaggtgctgatagagcagaaatatatagcttggctttctcgaataatttg
cagtatttggctgtatccagtgataaaggcacaatacatgtgttcaatctaaagataaat
gataagcctctgccgactccagatcccgaaattccccatttaagtcctcctctttctttc
attaagggtgtgttgccaaaatatttccactccgagtggtcagtagctcaattcaggctc
catgagggtgagcagtatattgttgcattcggacatgagaaaaataccgtgacagttgtt
ggtatggatggaagcttctacagatgccagtttgaccctgttaatggcggagaaatgttg
cagctggagtgctacaatttcttgaaaccatcagatcaaccgtag
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