Phragmites australis (common reed): 133928249
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Entry
133928249 CDS
T10575
Name
(RefSeq) protein argonaute 1B-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
paua Phragmites australis (common reed)
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133928249
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
133928249
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
133928249
microRNA pathway
RISC loading complex
133928249
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Ortholog
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GFIT
Other DBs
NCBI-GeneID:
133928249
NCBI-ProteinID:
XP_062230478
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Position
9:complement(499298..506353)
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AA seq
1066 aa
AA seq
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MVRKKRTGPGSSGESSGEASGVSEQSSSQRPERTQQQGGGRGWVPQQGGRGGGQHQGRGG
YQGRGGPPSHHPGGGPHEYHPREYQGRGGPRPRGGGVPQPYYGGHRGGSVGRSVPPGPSR
SVPELHQASHVQYQAPVAPPHPSGAGSSSQPAAEVSTGQVQQQFEQLAIRGQSSTSQAIQ
MAPASSKSVRFPLRPGKGTYGDKCIVKANHFFAELPDKDLHQYDVSITPEVTSRGVNRAV
MGELVRLYRQSHLSGRLPAYDGRKSLYTAGPLPFTSKTFEITLQDEEDSHGGAQGGQRRE
RVFKVVIKFAARADLHHLAMFLAGRQADAPQEALQVLDIVLRELPTARYSPVGRSFYSPN
LGRRQRLGDGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVAQLLNRDISVR
PLSDSDRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELSFPVDDRGTVKTVVQY
FLETYGFSIQHTTLPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNEKQITALLKVTCQR
PQERELDILQTVHHNAYYEDPYAQEFGIRIDERLASVEARVLPPPRLKYHDSGREKDVLP
RVGQWNMMNKKMVNGGKVSNWACINFSRNVQDSAARGFCHELAIMCQISGMDFALEPVLP
PVTVRPENVERALKVRYQDAMNILRPQGRELDLLIVILPDNNGSLYGDLKRICETDLGLV
SQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALTRRIPLVSDRPTIIFGADVTH
PHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKVWQDPQRGTVTGGMI
KELLISFNRATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLELNYQPPVTFVV
VQKRHHTRLFANNHNDHRTVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAH
YHVLWDENKFTADELQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPDTSDS
GSMASGATTSRGPPPGGARSSRVAGNVAVRPLPALKENVKRVMFYC
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaagaaaagaaccggtcctggcagctctggagagagttctggggaggcttcg
ggagtatctgaacaaagttcctcacagcgacctgagagaactcaacagcaagggggagga
cgtggttgggtgccccaacagggtggccgtggcggcgggcaacaccagggccgtggtgga
tatcagggccgtggagggccaccttcccatcacccaggtggtgggccacatgagtatcac
ccgcgtgagtaccagggacgtggtggtccacgccccagaggagggggagtgccgcagcca
tactatggcgggcataggggaggtagtgttggacgaagtgttcctccaggtccatcaaga
tcagttcccgagctgcaccaagcctcacatgtccaatatcaagccccggtggcgccacca
cacccatcgggagctggctcatcctcgcagcctgcggcagaggtgagcactggacaagtc
cagcaacagtttgagcaacttgcaattcgtggtcaaagttcaaccagccaagccattcag
atggcaccggcatcaagcaaatcagttagattcccgttgcgccctggcaagggtacttat
ggagacaagtgcattgtgaaggcaaaccatttctttgctgagctgcctgataaagacctt
caccaatatgatgtctctataacgcctgaggttacttcacgtggtgtcaatcgtgctgtc
atgggagagcttgtaaggctttatagacaatcccatttgagtgggcgtctacctgcatac
gatggaaggaagagcctttatacagctggaccattgccatttacttccaagacatttgaa
attactctgcaagatgaggaggatagtcatggtggtgcccaaggaggccaaaggcgcgag
agggtatttaaggtggtgatcaaatttgctgcccgtgctgatctccaccatctggctatg
tttctagctggaaggcaagcagatgctcctcaagaggctcttcaagtgcttgacattgta
ctacgtgaattgcctactgccaggtattctcctgttggtagatcattttattctcccaac
ttagggagacgccagcgacttggtgacggtttggaaagttggcgcggtttctaccaaagc
ataaggccaacacagatgggtctttcgctgaatattgatatgtcctccactgcatttatt
gagcctctccctgtgattgatttcgttgctcagcttcttaacagagatatctcagttaga
ccgttgtctgattctgatcgtgtgaagataaaaaaagccctacgaggtgtgaaagttgag
gtcacgcaccgaggaaacatgcgcaggaaatatcgtatatccggcctcacttcacaagca
acaagggagttgtcattccctgttgatgaccgtggtaccgtgaagactgtggtgcaatac
tttctggagacttatggtttcagtattcagcacaccactttaccttgcttgcaagtgggc
aatcagcaaagaccaaattatctgcctatggaggtctgtaagatagttgagggacagcgt
tactcaaaacgactcaatgagaaacagatcactgctctactgaaagtgacttgccagcgt
cctcaagagcgtgagctggacatcttgcagactgtgcatcacaatgcatactacgaagat
ccatatgcacaggaatttggcatacgaattgatgagcgacttgcatctgttgaagctcgt
gttctgcctcccccaaggcttaaataccatgatagtggcagagagaaggatgtgttgcct
agagttggccagtggaacatgatgaataagaaaatggtcaatggtggtaaagtcagcaac
tgggcatgtattaatttctcacgaaatgtgcaagatagtgctgccaggggtttctgtcac
gagctggctatcatgtgccaaatatctggaatggactttgcacttgaacctgtgctaccc
ccagtgactgtgaggcctgaaaatgttgaaagagcactaaaggtgcgttatcaagatgca
atgaacatactcagaccacagggcagagaacttgacctgctgattgtgatactgcctgac
aataatggttctctttatggggatctcaaaaggatatgtgagactgatcttggattggtc
tctcaatgttgtctgactaaacatgttttcaagatgagcaagcagtatcttgcaaatgtt
gcccttaaaataaatgtgaaggttgggggaaggaatactgtacttgtagatgctttgaca
aggagaatcccccttgtcagtgacagaccaactattatatttggtgctgatgttacccat
ccccatcctggagaagattccagcccttccattgcagctgtggttgcttctcaagactgg
cctgaagtcaccaagtatgcagggttagtgagtgcccaagcccatcgccaagagttgata
caagatcttttcaaagtgtggcaagatccccaaagggggactgtaactggtggcatgatc
aaggaacttctcatttctttcaatagggcaactggacagaaaccccagaggatcatattc
tacagggatggcgtcagcgagggacagttctatcaagttttgttgtatgaacttgatgcc
atcagaaaggcctgtgcatccttggagctcaattaccagcctccagttacttttgtagtg
gtccagaagcggcatcacactaggttgtttgctaataaccacaatgatcaccgtactgtt
gatagaagtggaaacatactgcctggcactgtggtggattcaaagatttgccatcccact
gaatttgacttctacctgtgtagccatgctggcattcagggaacaagccgccctgctcat
tatcatgttctgtgggatgagaacaaatttactgctgatgagttacaaactctcaccaac
aacttgtgctacacgtacgctaggtgcactcgctcagtatcaattgtgcctcctgcatac
tatgctcatctggcagcattccgagctcggttttacatggagccagatacctcggacagt
gggtcgatggcgagtggtgccacgacgagccgtggccctccaccaggtggtgcacgcagc
tccagggttgctgggaatgttgctgtgaggcctctccctgctctcaaggaaaatgtgaag
cgcgttatgttttactgctaa
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integrated database retrieval system
