Phragmites australis (common reed): 133928273
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Entry
133928273 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase RDUF2-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133928273
04121 Ubiquitin system [BR:
paua04121
]
133928273
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133928273
Membrane trafficking [BR:
paua04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
133928273
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133928273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1117
Zn_ribbon_19
zf-RING_2
zf-C3HC4_2
zf-rbx1
zf-RING_11
zf-RING_UBOX
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
zf-Nse
CxC4
Motif
Other DBs
NCBI-GeneID:
133928273
NCBI-ProteinID:
XP_062230514
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All DBs
Position
9:710870..712947
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AA seq
379 aa
AA seq
DB search
MASSPAASYWCYQCDRFVRAVPQDDDGSSAAVACPGCGGGFLEEMGAPPSRAAYLRRPRA
HHHTSDLRIRRSRRGAAHANAAGDRASSFNPVIVLRRSPAPGGVDDSPAAASTFELFYDD
GAGSGLRPLPESMSDFLMGSGFERLLDQLAQIEAGGLARARDNPPASKAAIESMPTVTID
DSHVGADSHCAVCKEPFELGAEAREMPCKHVYHHDCILPWLALRNSCPVCRHEMPTIAPR
SRAGNDGSSEEETTVGLTIWRLPGGGFAVGRFAGGRRPEERELPVVYTEMDGGFNNGGAP
RRISWGSRQSPSTERSTIRRILRNVFACFGRGHSSTSQASSSHTRPELNDAASDLSHGSR
SRSTSWRLEDGHADAMVQR
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttccccggcggcgtcgtactggtgctaccagtgcgaccgcttcgtccgcgcc
gtgccgcaggacgacgacggctcctccgccgccgtcgcctgcccgggctgcggcggcggc
ttcctcgaggagatgggcgcgccgccgtcccgggccgcctacctccgccgcccgcgcgcg
caccaccacaccagcgacctgcgcatccgccgctcccgccgcggcgccgcgcacgccaac
gccgcgggagaccgcgcctcgtccttcaaccccgtcatcgtgctgcgccgctcccccgcg
cccggcggcgtcgacgactcccccgccgccgccagcaccttcgagctcttctacgacgac
ggcgctggctccggcctccgcccgctccccgagagcatgtccgacttcctcatgggctcc
ggcttcgagcgcctcctcgatcagctcgcccagatcgaggccggcggcctcgcccgcgcg
cgggacaacccgccggcatccaaggccgccatcgagtccatgcccaccgtcaccatcgac
gactcccacgtcggcgccgactcccactgcgccgtctgcaaggagcccttcgagctcggc
gccgaggccagggagatgccctgcaagcacgtctaccaccacgactgcatcctgccgtgg
ctcgcgctccgcaactcctgccccgtctgccgccacgagatgcccaccattgcgccgcgc
tcccgggctggcaacgacggcagcagcgaggaggagaccacggtcgggctcaccatctgg
aggcttcccggaggcggcttcgccgtcgggaggttcgccggcgggaggaggcctgaggag
agggagctcccggtcgtgtacacagagatggacggcgggttcaacaacggcggcgcgccg
aggaggatctcgtgggggtcgaggcagagcccgtcgacggagaggagcaccattaggcgc
atcctgcgcaatgtcttcgcgtgcttcggccgcggccactcgtcgacttcgcaggcctcg
tcttcccacacgaggcctgagctgaacgacgcagcttccgatctcagccatggctcgaga
agccggagcacgagctggagactcgaggacggccacgccgatgccatggtgcagagataa
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