Phragmites australis (common reed): 133928400
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Entry
133928400 CDS
T10575
Name
(RefSeq) chromatin structure-remodeling complex protein BSH
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03082
ATP-dependent chromatin remodeling
paua03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133928400
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
133928400
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133928400
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133928400
03036 Chromosome and associated proteins [BR:
paua03036
]
133928400
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133928400
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133928400
SWI/SNF complex
133928400
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133928400
PBAF complex
133928400
SWI/SNF complex
133928400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
Motif
Other DBs
NCBI-GeneID:
133928400
NCBI-ProteinID:
XP_062230701
LinkDB
All DBs
Position
9:complement(2897165..2900241)
Genome browser
AA seq
259 aa
AA seq
DB search
MKTVSLGASRPSSVNFRMPTRDNLVPIRVDVEVDGQRYRDAFTWNPRDPDSEIITFAKRT
AKDLKLPANFVPQMLQSIQGQLAEFRSYEGQEMQIKEKIVPLKLDLRVNNTVIRDQFLWD
IGNLDSDPEEFARTLCDDLNITDPEVGPAIAVSIREQLYEIANQSVSVMREKQLSKKGRR
APEFSSNSKAMNNAVDLFKYFGSKGSVIRKRKEWYLYEPVVDVVPNAEAGVVDGKEELNP
SSRPKKRLEEVKDASLQSL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgaagacggtcagcctcggcgcctccaggccctccagcgtcaacttccgcatgccgacg
agagacaacctggttccgatacgcgtcgacgtcgaggtggacggccagcgctacagggac
gccttcacctggaacccgcgagatcccgactcggagatcatcaccttcgccaagaggacg
gccaaggaccttaagctgccggcaaatttcgtcccccagatgctgcagtccatccagggg
caactggcggagttccgctcttacgaggggcaggagatgcagatcaaggagaagattgtg
cctcttaagcttgacctccgagtgaacaacactgtaattagagaccaattcttgtgggat
ataggcaacctagatagtgaccctgaggaattcgcaaggacgctatgtgacgatttgaac
atcacggatcctgaagttgggcctgcaatagcagtttccatccgtgagcagctttatgag
attgctaatcagagcgtctctgttatgagagagaagcaattgtcaaagaagggaaggcga
gcgccggaattttcttcaaatagtaaagccatgaacaatgcagtggacttgttcaagtat
ttcggcagcaaaggaagcgtcattcggaaaaggaaggaatggtacctgtatgagcctgtt
gtagatgttgtacctaatgcggaagctggagttgttgatggaaaagaggagcttaatcct
agctctaggccgaagaagaggttggaagaagtgaaagatgcaagtcttcaatccctctga
DBGET
integrated database retrieval system
