Phragmites australis (common reed): 133928471
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Entry
133928471 CDS
T10575
Name
(RefSeq) serine/threonine-protein phosphatase PP1-like isoform X1
KO
K06269
serine/threonine-protein phosphatase PP1 catalytic subunit [EC:
3.1.3.16
]
Organism
paua Phragmites australis (common reed)
Pathway
paua03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
133928471
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
paua01009
]
133928471
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paua03021
]
133928471
03019 Messenger RNA biogenesis [BR:
paua03019
]
133928471
03041 Spliceosome [BR:
paua03041
]
133928471
Enzymes [BR:
paua01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
133928471
Protein phosphatases and associated proteins [BR:
paua01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
Catalytic subunits
133928471
Transcription machinery [BR:
paua03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
133928471
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
133928471
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
133928471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
STPPase_N
Motif
Other DBs
NCBI-GeneID:
133928471
NCBI-ProteinID:
XP_062230792
LinkDB
All DBs
Position
9:4322511..4327618
Genome browser
AA seq
328 aa
AA seq
DB search
MMMTRAPMGSMEGAAVDEVVRRLVEGGRGGRQVQLSEAEIRQLCVEGKRVLLSQPNLLRI
HAPVKICGDIHGQFVDLLRLFDLGGYPPASTYVFLGDYVDRGKQSLETICLLLAYKIRYP
EKIFLLRGNHEDAKINRVYGFYDECKRRFNVRLWKIFSDCFNCLPIAALIDDKILCMHGG
LSPELNSLDQIKDIERPAEIPDYGLLCDLLWSDPSPDGEGWGESDRGVSCTFGADKLVEF
LEKNDLDLICRAHQVVEDGYEFFAQRRLVTIFSAPNYCGEFDNVGALLSIDESLMCSFQI
LKPSDTGPPHARKQIPNKGLDWQHDFHF
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgacgcgagccccgatggggtcgatggagggcgcggcagtggacgaggtggtg
cggcggctggtggagggtggccgcggcgggcggcaggtgcagctgtcggaggcggagatc
cggcagctgtgcgtcgagggaaagcgggtgcttctctcccagccaaacctcctccgaatc
cacgcccccgtcaagatctgtggtgatatccatggccagtttgttgaccttctgagattg
tttgatttgggtggttatcctccagcgtcaacttacgtattccttggagactatgttgat
agaggcaaacagagtttggaaactatatgcttgctcctggcatacaaaatcaggtaccct
gaaaagattttcctgttaagggggaaccatgaagatgcaaaaatcaacagagtttatggt
ttctatgatgaatgtaagaggaggttcaatgttcgactgtggaagatattctctgattgc
ttcaactgcctgccgattgcagcactcattgatgacaagatactgtgcatgcatggtggt
ctctcacctgaattgaatagtttggaccaaataaaggatattgagaggcctgctgagatt
cctgattatggcctgctgtgtgatttgctttggtctgatcctagccccgatggagaaggg
tggggggagagtgacagaggtgtttcatgtacgttcggcgcagataagcttgtagagttt
ttggagaagaatgatctcgatcttatatgccgagctcatcaggtggttgaagatggttac
gagttctttgcgcaacggagattagtgacaatcttctcagctccaaattattgtggagaa
tttgataatgttggtgctctattgagcatagatgaaagcctaatgtgctcatttcagatc
ctgaagccaagcgacacaggtccaccgcatgcaagaaaacaaattccaaataagggactt
gattggcagcatgacttccacttttga
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integrated database retrieval system
