Phragmites australis (common reed): 133928513
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Entry
133928513 CDS
T10575
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic-like isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133928513
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
paua01007
]
133928513
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
paua03016
]
133928513
03029 Mitochondrial biogenesis [BR:
paua03029
]
133928513
Enzymes [BR:
paua01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
133928513
Amino acid related enzymes [BR:
paua01007
]
Aminoacyl-tRNA synthetase
Class I (G)
133928513
Transfer RNA biogenesis [BR:
paua03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
133928513
Prokaryotic type
Other AARSs
133928513
Mitochondrial biogenesis [BR:
paua03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
133928513
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
133928513
NCBI-ProteinID:
XP_062230845
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Position
9:5107864..5114785
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AA seq
654 aa
AA seq
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MRALAAAATAVAAPTPARLRLRLPRAPRSGHCRAASSARLPRSACSATTMGDETSTSVPA
KLQEPVEGAGSVKQQLSKLVASSLRTTVPEVDVEPMVEVCTAKFGDYQCNNAMGLWSRIK
GSGTSFKNPNAIGQAIAKNLPPSDIIESTSVAGPGFVNIVLSNRWVAKRIQDMLVNGISA
WAPILPVKRAVLDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVGVLRRNHVGDWGTQ
FGMLIEYLFEKFPNWQEIGSQAIGDLQIFYKASKHKFDNDPDFKDRAQQAVVRLQGGEEK
YRDAWKKICEVSRSEFDLVYKRLNVDLEEKGESFYNPYIPQVLEELNDKGLIKESEGARV
IFIEGHQIPLIVVKRDGGFNYASTDLAALWYRLNVEKAEWIIYVTDVGQQQHFDMFFRAA
RMAGWLPDPNEKTFPKTNHVGFGLVLGSDGKRFRTRSTEVVRLVELLDEAKSRSKIELLQ
RLTENGKIVEWTDEELEKTSEAVGYGAVKYADLKNNRLTNYTFSFEQMLSDKGNTAVYLQ
YAHARICSIIRKSNKDVEELKMSGAISLDHPDERVLGLYLIRFAEVVEEACTNLLPNVLC
EYLYNLSEMFTKFYTNCQVVGSPEETSRLLLCQATAVVMRQCFQLLGITPVYKL
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgcgagctctcgcggcagcagcaactgcagtggcggcgcctacccccgcgcgcctccgc
ctccgtcttccgcgcgccccgcgctccggtcactgtagagcagcttcttccgcaaggcta
ccgaggagcgcctgcagcgcgaccaccatgggagacgaaacctcgacttcggttcccgcc
aagttgcaggaacctgtggagggtgctgggagcgtcaagcaacagctctccaagttggtc
gcatcatccctccgcacaacagtgcctgaagtggatgtagaaccgatggttgaagtatgt
acagcaaagtttggtgactaccagtgcaacaatgctatgggattatggtcgaggattaaa
ggatctgggacaagtttcaaaaaccccaatgcaattggacaggccattgccaagaacttg
ccgccctctgatattatcgagtccacttctgttgctggacctggttttgtgaatattgtc
ttatcgaaccgctgggttgcaaagagaattcaagacatgcttgtgaatggcatcagcgct
tgggcaccaattctgccagtaaagagggcagtgcttgatttttcgtcgcccaatatcgca
aaggaaatgcatgttggacatttgaggtcaactattattggagataccttagcacgcatg
ttggagttctcaaatgttggtgttcttcgacgaaatcatgtgggagattggggtacacag
tttgggatgctcatagaatatctgtttgagaaatttccaaattggcaggaaataggtagc
caggccattggtgaccttcagattttctataaagcatccaaacataaattcgataatgac
ccggactttaaagatagggctcaacaagcagtcgttcggctacagggaggggaggagaaa
taccgagatgcatggaaaaagatttgtgaagttagccgaagtgaatttgacttggtctac
aagcgcctaaatgtggatcttgaagagaagggggagagtttctataatccttatattcct
caagttttggaggaattgaatgacaaaggcttgatcaaggagagtgagggtgctcgagtg
atattcattgaaggtcatcaaatccctttgatagtggttaaaagagatggcggcttcaac
tatgcctcaacagacttagctgctctttggtatcggctcaatgtcgaaaaggcagaatgg
atcatttatgtcaccgatgttggtcagcagcaacactttgacatgtttttcagagctgct
aggatggctggctggctcccagatccaaacgaaaagacgtttccaaaaacgaatcatgtt
ggatttggtcttgttcttgggtcagatggcaagcgcttccgcactcgtagtactgaagtt
gttcgattggtagagctacttgatgaggcgaaatctcggagtaaaatcgaactcctgcag
cgtctcaccgaaaatggtaaaattgttgagtggacggatgaggaactagaaaaaacttca
gaggcagttggatatggcgctgtgaagtacgctgatttgaagaacaataggctgaccaat
tacacatttagttttgaacagatgctaagcgataagggaaacactgctgtgtaccttcag
tacgctcatgctcgcatttgctccatcatccggaaatccaacaaggatgtggaagagctg
aaaatgagtggagccatttctcttgaccatccagatgagcgtgtcttgggactgtatctt
atccgatttgcagaggttgtcgaagaggcatgcaccaatctcctgccaaatgttctgtgt
gaatacttatacaatttatctgaaatgttcacaaaattctataccaactgtcaggtggtc
gggtcaccggaggagacaagccggctgctgctttgccaagcgactgccgttgtcatgcga
cagtgcttccagctgctcgggataacgccagtttacaagctgtga
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