Phragmites australis (common reed): 133928654
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Entry
133928654 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Pathway
paua04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133928654
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133928654
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133928654
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
133928654
BRITE hierarchy
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GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
133928654
NCBI-ProteinID:
XP_062231063
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All DBs
Position
9:13043583..13050766
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AA seq
352 aa
AA seq
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MDVDSVECLSLPDASMDVDDVDSHHHHHHHLGLPLHPTHLAAGAGGASVARAFPKVNAGV
GPGAAGAVGAGPGAGAAGGWPATSVHELLECPVCTNSMFPPIHQCQNGHTLCSTCKARVH
NRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEAQCSFRPYNCP
YAGSECAVVGDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQ
YFCLHFEAFQLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHR
KVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRIWKEQTNLDGACIPNLCS
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggacagcgtggagtgcctctcccttcccgacgcctccatggacgtcgacgac
gttgacagccaccaccaccaccaccaccacctcggcctcccgctccaccccacccacctc
gccgctggcgccggcggggccagcgtggcccgcgcgttcccgaaggtgaatgccggggtc
gggcccggtgctgcgggggcggtgggagcggggcccggggcgggcgccgcaggcggatgg
ccggcgaccagcgtccacgagctgctcgagtgccccgtctgcaccaattccatgttcccg
cccatccaccagtgccaaaatgggcatacattatgttcgacatgcaaggccagggtgcac
aaccggtgtccgacatgcagacaagagcttggtgatatcagatgcttggcattggaaaaa
gtagcggagtcacttgagcttccctgtaagtactgctctttaggttgccccgagatattc
ccatactacagcaagataaagcatgaagcacagtgcagcttcaggccatataactgcccc
tatgctggctctgaatgtgctgtggttggtgatattcctttcctcgttgcacatttgagg
gatgatcacaaagttgacatgcacagtggctgcacattcaaccatagatatgtgaaatct
aatccgcgagaggttgaaaacgccacctggatgctaacagtatttcattgttttgggcag
tacttctgcctgcactttgaggccttccagcttggaatggcaccggtttacatggctttc
ctccgtttcatgggggatgagaacgaagcaaggaactatacatatagccttgaggttggc
ggtaacgggaggaaaatggtatgggaaggcactcccagaagcatccgtgacagccaccgc
aaggtccgggacagccatgatggcctcattatccagaggaacatggcgctgttcttctcc
ggaggtgacaggaaggagctgaagctgagggtaaccggccggatctggaaggagcagacc
aacctggacggagcctgcataccgaacctttgcagctga
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