Phragmites australis (common reed): 133928662
Help
Entry
133928662 CDS
T10575
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133928662
Enzymes [BR:
paua01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133928662
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133928662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
133928662
NCBI-ProteinID:
XP_062231080
LinkDB
All DBs
Position
9:complement(14108546..14118541)
Genome browser
AA seq
860 aa
AA seq
DB search
MDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVMGDKHCCICKTHCPSVFVTRAMGD
YTRVVADFSVFPPGVNEGKVGNYWYHEDTQAYFDDGDHYRMIRAMCRLSCSVCDNAEDQV
TLAAQAKCRSKFSSIKQLNGHLHQAHKLHMCTLCLEGRKVFICEQKLYTWSQLAQHMKTG
DSEVDGSEVERSGFAGHPMCEFCKSSFYGDNELYTHMSREHYSCHICQRQHPGQYDYFRN
YDDLELHFRKDHFLCEDEACLVKKFVVFQSEVQLKRHNAMEHGGRMSRAQRNAALQIPTS
FIYRRNEEDQRRGRGRRCNAHRDASDGHISSSAQNGSVTVDDAPAGQVDKVTGSLQSSSV
TSSSGRAEIGQSSRTGRMLEQLSFPPLSDPDIPDARTDAVPDETSFPSLSEQQSRYAQAL
NQSARGAARLGDESLFPPLPGSSNNRGAASTQQGLQSLAKSTLAARLQHSKGPVKVVHTS
QPRTSENPELLPSVSSSTQTWPTPDQGLLLSGSSQLRIGSKPKRENGFMPTVSSNSAWNH
GPNKMKHSVSTPNLVSGGSGQASSNTAYYCGNKSQELPQSSQTMPADGVRAANKSLVERM
RAALGMDEDRYSAFKEIAGEYRQGIIDTSEYLSYVEQFGLSHLVPEMARLLPDPQKQRAL
ADAYYTNIQFKSLQENGGCGTSSKEGNSKKKGKGKAPDVSESSAAKAAKDSLADSFLDTV
RRLQSNHHAQEGESEVLSRDGYRPSKGIQSSAGCSSSAGVSLDNDTGSISKASGAKDNAG
RGGGNSRSNNSKQSKKTSKVLRARLGDNSLATLDLSHPSVSTEHPERESQGTQAPQMGLP
VRGVWKDGVGQKLFSSNGRK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggacgacagctgcgcggtatgcgcggacgcgctggagtgggtggcctacgggccttgc
gggcaccgcgaggtgtgctccacctgcgtcgtccgcctccgcttcgtgatgggggacaag
cactgttgcatctgcaagacccactgcccctccgtcttcgtcaccagggcaatgggtgat
tacacgagagtggtcgccgatttctctgtgttcccccctggggtaaatgagggaaaggtg
gggaattactggtaccatgaggatacacaggcatattttgatgatggcgaccattacagg
atgatacgtgcaatgtgccggctttcatgtagtgtttgtgacaatgcggaggatcaggtt
actcttgctgctcaagcaaagtgccgaagcaagttcagtagcatcaaacaactgaatgga
catttgcatcaagctcataagttgcacatgtgcactctttgcttggaggggaggaaggtg
ttcatttgtgaacagaagctttatacatggtcacagttagctcagcatatgaaaactggc
gactctgaggtggatggctctgaggtagagcgcagtggttttgctgggcatccaatgtgt
gagttctgcaaaagttcattttatggagataatgagctttacacacatatgtctagagaa
cactattcctgccacatatgccaaaggcagcatcctgggcagtatgattattttcggaac
tatgatgaccttgagttgcattttcgaaaagatcatttcctctgtgaagatgaagcatgt
ttggtgaagaagttcgttgtcttccagagtgaagtgcagctcaagagacataatgcaatg
gagcatggtgggcggatgtctcgtgctcagaggaatgctgcacttcagatacctaccagt
tttatatatcgcagaaatgaggaagaccaacggcgtggcagaggtaggaggtgtaatgct
caccgtgatgcatctgatggtcatatttcatcatctgcgcagaatggtagtgtaaccgtg
gacgatgcccctgcaggccaagttgataaggttacagggtctttacagtcatcaagtgtc
acttctagttctgggcgagcagaaattggccaaagctcaaggactggacggatgctggaa
cagttgtcctttcctcctctttcagacccagatattcctgatgcaagaactgatgctgtt
cctgatgaaacctcatttccttcgctatcagagcagcaatcaaggtatgcacaggctctc
aatcagagcgcaaggggtgctgcaaggcttggggatgagtcattattccctcctttacct
gggtctagtaacaacaggggtgctgcttcaacacaacaggggctacaaagtctagctaag
agcacacttgcagcaaggcttcaacatagtaagggccctgtgaaagtagtccatacttct
cagccccgtacctctgaaaatcctgaattgctcccttctgtttcaagttccacccagaca
tggcctacacctgatcaggggctactcctgtctggttcttctcagcttcgaattggatct
aaaccaaaaagagaaaatgggttcatgccaactgtctccagtaactcagcatggaatcat
ggaccaaacaagatgaagcactctgtttctactcctaatcttgtgtctggtggctctggc
caagcatcatcaaatacagcttattattgtgggaataaaagccaagaactgccccaaagt
agccaaactatgcctgctgatggtgtccgagctgcaaacaaatctcttgttgaaagaatg
cgtgctgctttaggaatggatgaggataggtattcggcatttaaagagattgctggtgaa
taccgtcaaggtatcatagatacttcagagtatctttcatatgttgagcagtttggactc
tcgcaccttgttcctgagatggcaaggctattacctgatcctcagaagcagagagcactt
gctgatgcatattataccaacatacagtttaaaagcctccaagaaaatggcggatgtgga
actagctcgaaagagggtaacagtaaaaagaaggggaagggaaaagctcctgatgtttca
gaaagtagtgctgctaaggctgcaaaggattctttagcagatagctttctggacactgta
agaaggcttcaatcaaaccaccatgctcaggaaggagagtctgaggtgctctcaagggac
gggtatcgaccttccaaggggattcaatcatcagctggatgttcatctagtgcaggtgtg
agtctagacaatgatactggttccatttcaaaggcttctggtgccaaagataatgcgggc
aggggaggagggaatagcagaagtaacaacagtaaacaatcaaagaagacatcaaaggtt
ctcagagctcgtctaggcgacaactcattagctacacttgatttaagtcaccctagtgtg
agtactgaacatccagaaagggaatcacaaggcacacaagctccacagatgggattgcct
gtgcgaggtgtttggaaggacggtgtggggcaaaaactcttttcaagcaatggaaggaag
taa
DBGET
integrated database retrieval system
