KEGG   Phragmites australis (common reed): 133928844
Entry
133928844         CDS       T10575                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
paua  Phragmites australis (common reed)
Pathway
paua03020  RNA polymerase
paua03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:paua00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133928844
  09124 Replication and repair
   03420 Nucleotide excision repair
    133928844
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:paua03021]
    133928844
   03019 Messenger RNA biogenesis [BR:paua03019]
    133928844
   03400 DNA repair and recombination proteins [BR:paua03400]
    133928844
Transcription machinery [BR:paua03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     133928844
Messenger RNA biogenesis [BR:paua03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     133928844
DNA repair and recombination proteins [BR:paua03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      133928844
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 133928844
NCBI-ProteinID: XP_062231327
LinkDB
Position
9:complement(23710920..23713417)
AA seq 177 aa
MFFHIVLERNMQLHPRHFGPHLRDKLVSKLIKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGYVTFPVKYQCVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHLIPDDMEFQ
SGDVPNYTTSDGSVKIQKESEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPGSAV
NT seq 534 nt   +upstreamnt  +downstreamnt
atgttcttccacatcgtgctggagcggaacatgcagctgcacccgcggcacttcgggccg
cacctccgcgacaagctcgtctccaagctcatcaaggacgtcgagggcacctgcagcggg
aggcacgggttcgtggtggcgatcacgggggtagaggacatcgggaaggggctcatccgg
gagggcaccggctacgtcaccttccccgtcaagtaccagtgcgtcgtcttccggcccttc
aagggcgagatcctcgaggccgtcgttaccatggtcaataagatgggcttctttgcagag
gccgggccggtgcagatcttcgtgtccaaccatttgattcctgatgatatggagttccaa
tctggtgatgtgccaaactacacaacgtctgatggatcggtgaaaattcaaaaagagagt
gaagtgcggttgaagattattggcactcgtgttgatgcaacagaaatcttttgtatcgga
acaattaaagatgactttctgggtgttatcaatgatcctggatcagcagtgtaa

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