Phragmites australis (common reed): 133929048
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Entry
133929048 CDS
T10575
Name
(RefSeq) serine/arginine-rich splicing factor SR45-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
paua Phragmites australis (common reed)
Pathway
paua03013
Nucleocytoplasmic transport
paua03015
mRNA surveillance pathway
Brite
Messenger RNA biogenesis [BR:
paua03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
133929048
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Gene cluster
GFIT
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NCBI-GeneID:
133929048
NCBI-ProteinID:
XP_062231621
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Position
1:55507624..55512556
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AA seq
419 aa
AA seq
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MAKPRRGRSGSRSSSGSSSRSISSGSVSSRSRSRSSSSSSPSRSRSPPAPRRSSPGARKG
RSPSPPPKKGSPSRKGRSPSPPPKKASPPRKASPLPESVVLHIDHLSRNVNEAHLKEIFG
NFGEVVNVELAMDRLVNLPRGYGYIEFKKKTDAEKALLYMNGAQIDGNVVRLRFTLQPRQ
RAPSPMKAPPPPKRDAPQNEKAASSAEKDAQQRPREPSPRRKPASPPRKRSPNRRAESPR
RPPDPSPRHRPDSPPVRRRADPSPVRRGDTPPRRRPLSPVRRRSPSPPPRRHRSPMRPSP
RRGRGSPSPRRRSPGPLRRRSPPPRRLRSPPRRPPPPRRYSRSPPRRPLHSRSRSISPRR
GRGPPLRRGKSDSSYSRSPSPPRKGPRRVSRSRSPRRPPRGRSISSDSRSSSSPSPRRR
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcctcgtcgcggccgctccggctcgcgctcctcctccggatcttcctcccgc
tccatctcctccggctccgtctcgtcccgctcgcgctcccgctcgtcgtcgtcgtcctcc
ccgtcccggagccgctcccctcccgcacccaggcgcagctcacctggagcacggaaaggt
cgatcaccttcaccacctcctaaaaaaggttcaccctcaaggaaaggccgttcaccatct
ccgccacctaaaaaggcttcacctcctaggaaagcgtctcctcttcctgagtcggttgtt
ctccacattgatcatttgtcaaggaatgttaatgaggctcacttgaaagagatatttgga
aactttggtgaagtggtgaatgtggagctagcaatggaccgattggttaatcttcctcgt
gggtatggatatattgaattcaagaagaaaactgatgctgagaaggctcttctttacatg
aatggtgcgcaaattgatggaaatgttgttaggttgagattcactcttcaaccacgccaa
agggctccttcacctatgaaggctcctccccctccaaaaagagatgctcctcagaatgag
aaagctgctagcagtgctgaaaaggatgctcagcagcgtcctagggaaccatctccacga
agaaagccagcttcacctccacgaaagcgatctccaaatagaagggccgagtcacccagg
cgtccacctgacccatcacctaggcatcgtcctgattctccacctgttcgtcgtcgagca
gatccttcccctgtcaggcgtggtgacacacctcctcgccgcagaccactatctccagtt
agaaggcgttctccttctccaccacctagaaggcataggtcaccgatgcgtccttcacct
aggaggggtcgtggcagtccttcaccacgcagacgctcccctgggcctcttagacgccgg
tcaccacccccaaggcggttgaggagtccaccaagaaggccaccacctccacgtcgttat
agtcgttcccctcctcgccgccctctccactcacggtccagatcaatatctcctagaagg
ggtcgaggacctccattgaggcgtggaaagtcagattcatcatattctcgatcacccagt
cctccaagaaaggggccaagaagggtgtcaaggagtcgcagccctaggaggcctcctaga
ggaagaagcatctctagtgacagtcggagtagcagttcaccttcccctaggcgcaggtag
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