Phragmites australis (common reed): 133929172
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Entry
133929172 CDS
T10575
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
paua03009
]
133929172
Ribosome biogenesis [BR:
paua03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
133929172
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Gar1
Motif
Other DBs
NCBI-GeneID:
133929172
NCBI-ProteinID:
XP_062231802
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Position
9:complement(31713855..31717577)
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AA seq
696 aa
AA seq
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MGRHPKPPPPRPPPDSDPGVGFDPVEEWLVDFDQAMEGELGAKSLGPTEEAVVPRAPRPT
TTCGDAGKVSDGSAAPKSCEFGVKEEGSLGQAGDFCGEEIDEKAEMASGGLCELLAPDQL
LASGIGDLAVKEDISEGAVATEVGAAPTDVEMNIAASVKEEGGGDKEKQDSSEEESESSE
EDESSEASSSSEEEEEQRPKKDEESSEASSSSDEEEELGAKKLCGAGGAEGDSLEALLEE
GELMVGSDEEGEEPKGPIKSKHQAEVLTPVPKIEIQLEPHHQTLPVGSITAIMGERVIVE
GSVQHNPLNEGSILWITESRMPLGIIDELFGPVKNPYYLVRYNSEEEVPAGISVGNSVSF
VAEFADHILNMKELYAKGYDASGDNDEVLEDELEFSDDEKEAEYKRSLRQAKRQTDRQHE
PNKPSGDKRRSQPRGAGFRKDMPPRNRDAQTPGHQSQPRFHRSDMSPAVAKNAARPLGPQ
NIPVSAPTMPPPVQMNPAMPSPVYHANQMGGCFVNPAQQFLPQQPNMVWPGGLPPPPHLN
MGVEGAALAANIMQNLFAGTNQFQNQNFGGFPNQMLMPFPQFMPQTVMPANPLTFGGGPP
VNSPFGPPPLLPMGQGNFGQPPHMAGDRQEQGHPPPGFPPNSQGFGNLAQPHGDGEHSPM
QLNSGQFNRGSSSFRGRKPQQRGGRHSSGRGIRHSR
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcatcctaagcccccgccgccgcgcccgccgccggactcggaccccggcgtc
ggattcgaccccgtcgaggagtggctcgtcgacttcgaccaggccatggagggcgagctg
ggggccaagagcctcggccccaccgaggaggcggtggttccgcgcgcgccgaggccgacg
acgacctgcggcgacgctggaaaggtctcggatggttcggcggcgcccaagagctgcgag
tttggtgtgaaggaggaggggtcgctcggccaggcaggagatttttgcggcgaagaaatt
gacgagaaggctgagatggcgagcggcggattgtgcgagctgcttgccccggatcagctt
ctggcgtcggggattggtgatttggctgtaaaagaggatatttcggagggagcggttgct
acggaggtgggtgctgcacctactgatgttgagatgaatatcgcagcctcggtgaaagag
gaaggcggaggcgacaaggagaagcaggatagcagcgaggaagagtcggagagtagcgag
gaggacgagtcgagtgaggcttcctccagcagcgaggaggaggaagagcagaggcccaag
aaggatgaggaatcgagcgaagcctcgtcaagcagtgacgaggaggaagagctgggagcc
aagaaactttgtggcgctggtggagcggagggtgatagcctggaggccctccttgaggag
ggcgaattgatggttgggagcgatgaggagggtgaggaaccgaagggccccatcaagtcc
aaacatcaagcagaggtccttactccagtcccaaagattgaaatacagttggaaccacat
catcagactcttccagtaggatctatcacagctataatgggtgagagagtgattgttgaa
gggtcagtccaacacaatcctctgaatgagggctcaatcctctggataacggaaagcagg
atgccacttggtatcattgatgagttgtttggacctgtaaaaaacccatactaccttgtg
cgatacaactctgaggaagaagtgcctgctgggatcagtgtaggaaacagtgtctctttt
gtagcagagtttgcagatcacatcctgaatatgaaggagctctatgcaaaaggctacgat
gcatccggagacaatgatgaggtgctagaagatgaacttgaattctctgatgatgagaag
gaggctgagtacaaaaggtcattacgtcaagcaaaaaggcagactgatagacagcatgaa
cctaataaaccttctggtgataagaggagatcacagcccagaggtgctggatttcgaaag
gacatgccaccaaggaaccgggatgcacaaacaccaggtcaccagtcacagcctcgtttt
caccgctcagatatgtcccctgcagttgctaaaaatgcagcacgcccattgggacctcaa
aacattcctgtgagtgctccaacaatgccgccacctgtccagatgaatcctgccatgcca
tcacctgtttatcatgcaaatcagatgggtggttgcttcgtcaatccagcgcagcagttc
ttgccacagcagccaaacatggtttggcctggcgggcttccaccaccgccccatctgaac
atgggggtagagggagctgctctcgctgcaaatatcatgcaaaacctcttcgctggaacg
aaccagttccaaaatcagaatttcggtggcttcccgaaccaaatgctgatgccctttcca
cagttcatgccccagactgtaatgcctgcaaatccattgacgttcggtggtggaccaccg
gtgaactccccatttggtccaccacctctactgcctatggggcaaggcaactttggccag
cctcctcacatggccggggatcggcaggaacagggacaccctcctcccggatttcctccc
aactcacaaggatttggaaacttggcgcagccccatggagatggagagcattcacctatg
cagctcaattctggacagttcaatcgaggcagctcgtccttccgtggcagaaagccgcag
caacgcggtggccggcattcctctggcagaggcatccggcatagcagatag
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