Phragmites australis (common reed): 133929177
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Entry
133929177 CDS
T10575
Name
(RefSeq) protein RNA-directed DNA methylation 3
Organism
paua Phragmites australis (common reed)
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Gene cluster
GFIT
Motif
Pfam:
KOW1_SPT5
KOW4_SPT5
Spt5-NGN
KOW
KOWx_SPT5
KOW5_SPT5
Spt5_N
Motif
Other DBs
NCBI-GeneID:
133929177
NCBI-ProteinID:
XP_062231805
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All DBs
Position
9:31798978..31812380
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AA seq
1556 aa
AA seq
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MAVKGKGKQVATDPPGAGGASGSGGKRRKAAGVAGPSSSSAAAAKRRRRSGALQFVDDAA
GVDDEYEEEEDESEEDLDDGFFTEEHAEHVSHKRTERSHPLPFLVKEEELSGDELEEFIK
NRYSNGVKYAADRNYHKKDDDDMFPMDGALKEPTIWRVKCMVGRERQMAFCFMQKFVDLQ
RMGTKVPIITAFALDHVRGFVFVEAEKACDVTEACKGFCSVYASRITSVPAAEVPSLLSS
RTKPFEISRGTWVRMKNGNYKGDLAQVVSADDGRKRVLIKIIPRVDLHAISKKYGGAISL
KEAAVPAPRLISSQELEFFRPHIEMKRDRQTGDVFEVLDGLMFKDGFLYKRVALSSLIYW
GIQPTETELLKFSSSPSNRSSADDLDWVSSIYGPKKRNLPKERDVKASSSKMKSSKASNL
KASTSTENYDDNDEFNLHDLVLFGRKDFGVVIAVEKDGFKILKGGPEGSAVTLRKQEIKK
GCVDKMFTAVDHQKKIISINDTVKVLEGPSQGKQGVVKHLYMGILFIYNESESENCGFFC
AQCVSCENIKKRKDMGSSATENLEDNPIPMFSEPTYEHNEHRDSERPCRSTREQLFSIGQ
MLRIRKGPLKGYLCRVVRIFRNDVTVKLDSLLKIVTVQAEFLSVPANRGDNSSGVPAGNF
GSQDTSFFGSEADKTSWDNGLPSFGSDSWQPFSSSTLPIQNADGESKVDPWFKKKSDEDD
SDPWGKKTVPSADGDSDPWGKKMVSSADDDTDPWGKKTTSSAVEVWNNSAAQKESSNDNA
WDKQAGVGGSDVAGSSWDRAAVNKDSEKSDNWGEACRVADMGTSGNTDPWGSNVKVVDTK
ETDSWEKATVPPNNKLEGDSQQGWAQPLCKSNENQGKGKTANDADNSGAWDTAVTNRTGS
SVIGKGDGDAWVKSDALPIAEDETWGKSKDNNGDGAVGWNEAKSSDKNCGAGGWDTAASN
WNKSSAVDEAWGKGKESSANSEERDNGRNDEGSWKSSWGGDNAGRPSWKSDSQVDNEAGD
SGGYRGRGRGQYGGRGRGRDNGWRNGDRSNSRFGMESGSGDGPKWGNSGSSDWDKSASNK
GSWGGGDNWTTTNPSSSQPWSSSGGTKSYGENQPSTWNSSKDNKPSVGEQNDPWASKVTS
TEGREQQNDTWASKMTSTAGAKDSSGDWNAKAKDSSCSVGGKEQETDPWASKVSSTEGAD
DNNDSWNTKGTPSGSVGKLGNAAPGSSGAEEKADAWSSKWGNDNNKKTDGWSADFSGGNQ
ESSWSKPSFSLEDQTPAWSRPRYGDDNNGNNRGGFGRGNRGRGGRGRSFGDSGSSWNGGN
RNDESGGERSEDHWNRRNFDGGRGRGRGRFGRGDRDQGNNFGSGDGGSWGSGRGNSGRGG
YRNWNDNNERRPFGQGGDWNTNKGSSEGDQAFSKSKPGWGSDNNDSWGAPKISGGNDQAG
KSDEINTWSQNSSSSSILGQPSGNAKDSSAWGAPSDTTTGGGAGGRSWERSNEDSWNPSK
RTGGTEKSSWDGSEAAPKKDGEGSGSQGGGGGSSWDKASDGAWNSNKGSDAGSGGW
NT seq
4671 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaaggggaagggcaagcaggtggccacggacccccctggcgccggtggtgcc
tccgggtccggcggaaagcggcggaaggccgccggcgtcgcggggccctcgtcgtcctcc
gccgccgccgcgaagcgccgccgccgatccggtgccctccagttcgtcgacgacgcggcc
ggcgtcgacgacgagtacgaggaggaggaggacgagtccgaggaggacctcgacgacggt
tttttcactgaggaacatgcagaacatgtcagccacaaaagaactgaaaggtcacaccct
cttccatttcttgtaaaggaagaggagcttagtggtgatgaacttgaggaattcatcaag
aaccgttatagtaatggtgtgaaatatgctgctgatcggaactatcataaaaaagatgat
gatgacatgtttccaatggatggtgctctgaaagagcctactatttggagggttaaatgc
atggttgggcgcgagcgccaaatggctttctgcttcatgcagaagtttgttgacctgcag
agaatgggtaccaaagtgccaattatcacggcatttgcacttgatcatgtgagaggattt
gtttttgttgaagctgagaaggcctgtgatgttacggaggcatgcaaaggattttgtagc
gtgtatgcaagcagaattacttctgttcctgcagctgaagttcctagcttgttatccagc
cgtacaaaaccatttgaaatctctcgtggtacatgggtccgcatgaagaatggaaattat
aaaggagatctagcgcaggtcgttagcgcggatgatggacggaaaagagtgctgataaag
attatacccagagttgacctccacgctatttcgaaaaaatatggtggtgcaatttcgcta
aaagaagctgcagttcctgccccacgattaatcagctcacaagaactagagttcttcaga
cctcatattgaaatgaagcgtgatcgtcagactggtgatgtttttgaagtgcttgatggc
ttgatgttcaaagatggttttctgtataaaagggttgcacttagttctttgatttactgg
gggatacaaccaacggagactgaacttctgaagttctcttctagtccaagcaatagaagt
tctgctgatgacttggattgggtctccagcatctatggtcctaagaaaaggaacctgccc
aaagaacgtgatgtgaaggcatcatcttctaaaatgaaatcctccaaagcatcaaatctt
aaagcttcgacttctactgaaaattatgatgataatgatgaattcaacctccatgatctt
gtactctttgggcgaaaagattttggtgtggtcattgctgttgagaaagatggttttaag
atattaaagggtggtcccgaaggatctgcagtaacattgagaaagcaggagattaagaaa
ggttgtgtagacaagatgtttacagctgttgaccatcagaagaagataatatctattaac
gacactgtcaaagttctggaagggccatctcagggtaagcaaggagttgttaaacacttg
tacatgggaatacttttcatttataatgaaagtgaaagcgagaactgtggttttttctgt
gcccaatgcgtgtcatgtgaaaatattaaaaaacggaaggatatgggaagttctgctact
gaaaatttggaggacaatccaattcccatgttttcagagccaacttatgagcacaatgag
catcgtgacagtgaaaggccttgcaggagcaccagagaacaacttttctctattgggcag
atgctgcgcattcgaaagggtcctttgaagggctatctctgtcgagtagttcgaatattt
cggaatgatgtgactgtaaagctagattctctactaaagattgttacagtgcaagctgag
tttctctcagtcccagctaacaggggggataattcgtctggtgttccagctggtaatttt
ggaagtcaagatacatcattctttggttcagaagcagacaaaacctcttgggacaacggg
ttgccatcttttggcagtgactcatggcaacccttttcaagttccaccttaccaatccag
aatgcagatggagaatcaaaggttgatccgtggtttaagaaaaaatcggatgaagatgat
tctgatccatggggtaagaaaacagtaccttctgctgatggtgattctgatccgtggggt
aagaaaatggtttcttctgctgatgatgatactgatccttggggtaagaaaacaacatct
tcagctgttgaagtatggaacaatagtgctgcacaaaaggaaagttccaatgacaatgca
tgggataaacaagctggagttggtggatcagatgttgctggcagctcttgggacagagca
gcagtcaataaggacagtgaaaagagtgacaactggggagaggcatgcagggtggcagac
atgggaactagtggtaacacagatccttggggtagcaatgtcaaagtagttgatacgaaa
gaaacagatagctgggaaaaggctacagtgcctccaaataataagttggagggtgacagt
caacaaggatgggcccaacctttgtgcaagtcaaatgaaaaccaaggaaaaggcaaaact
gccaatgatgcggacaatagtggggcttgggacactgctgttactaatcggactggatca
tctgttattgggaaaggggatggtgatgcctgggttaaatctgatgctttgcctatcgct
gaagatgaaacctggggcaagtcaaaagacaataatggtgatggagcagttgggtggaat
gaagctaaatcctctgacaaaaactgtggcgcgggaggttgggatactgccgcttccaac
tggaataaatcatctgcagtggacgaagcttggggcaaaggaaaagagtcatctgctaat
tctgaagaaagagacaatggcagaaatgatgagggaagctggaagagctcatggggaggt
gacaatgctggaaggccctcttggaagtctgatagtcaggtagacaatgaagctggagat
tctggtggatacaggggaagagggagggggcaatatggagggcgagggagagggagagac
aatggttggagaaatggtgatagaagcaattccagatttggaatggaaagcggcagtggt
gatgggccaaaatggggaaacagtggttcttctgattgggataaaagtgcatccaataaa
ggttcttggggtggtggagataattggaccaccacaaatccatcaagtagccagccctgg
agtagcagtggaggcaccaaatcatatggtgaaaatcaaccctccacttggaacagttca
aaggataacaaaccatctgttggtgaacaaaatgatccttgggcaagcaaggtgacttct
accgaaggcagagaacaacagaatgatacttgggcaagcaagatgacttctactgctggt
gccaaggatagcagtggtgactggaacgccaaggcaaaagactcttcctgcagcgttggg
ggtaaagaacaagaaactgatccttgggcaagcaaggtgtcttctactgagggtgctgat
gacaacaatgatagctggaacactaagggcactccatctggcagtgtgggcaagctgggc
aatgctgcacctggtagttctggagctgaagaaaaggctgatgcctggagtagtaaatgg
ggtaatgataataacaagaaaacagatggctggagtgctgacttctcaggtgggaatcag
gaatcttcttggagcaaaccaagtttctctttagaagatcagacacctgcttggagcagg
ccaaggtatggtgatgataataatggaaataataggggtggatttggacggggaaatcga
ggcagaggagggagaggaaggagtttcggggatagtggatcctcatggaatggaggcaac
agaaatgatgaatcaggtggcgaaaggtctgaagaccactggaacaggaggaattttgat
ggtggcagaggaagagggagaggacgctttgggcgaggtgatcgtgatcaaggtaacaac
tttgggtcaggagatggtggtagttggggctctggcaggggtaatagtggccgaggtggt
tacagaaactggaatgacaacaatgagagaaggcccttcggtcaaggcggtgactggaat
accaacaaaggaagcagcgaaggagatcaagctttctcaaaaagcaagcctggctggggg
agtgacaataatgatagctggggagcgccaaagatatctggtggaaatgatcaggcagga
aagagtgatgaaatcaacacctggagtcaaaacagttcatcttcgtctatcctgggtcag
ccaagcggtaatgctaaggattctagcgcatggggtgctcctagtgacaccaccactggt
ggaggagcaggcggacgctcttgggaaaggagtaatgaagatagctggaatccttcgaaa
agaactggaggtacagagaaatcttcatgggatgggtcagaagctgctccaaagaaagat
ggcgaagggagcgggagccagggaggaggtggcggcagttcctgggacaaagcttcggat
ggtgcatggaacagcaacaagggtagcgatgctggcagtggtggatggtaa
DBGET
integrated database retrieval system
