Phragmites australis (common reed): 133929289
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Entry
133929289 CDS
T10575
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
paua03041
]
133929289
Spliceosome [BR:
paua03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133929289
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Sigma70_ner
Motif
Other DBs
NCBI-GeneID:
133929289
NCBI-ProteinID:
XP_062231971
LinkDB
All DBs
Position
9:33297524..33300734
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AA seq
371 aa
AA seq
DB search
MATMNPFDILGADDNDDPTQLLAAAAVAKQKAETKKSAAATAGKGAQPATAKLLTKPAPP
AQAVRDSRSGGAPSRGGFGRGERGRGRGGRGYGQNREFGSEDANGFQGGYGAGGGARAGG
EGAQDRERGPQPPYRGGGGRRGGYRDGEFGDDSERPPRRTYERHSGTGRGYEVKREGAGR
GNWGTTTDEIIAQETEEGLKLDAPVPEKQDAQEDAPQAEENKDNKDATVNEEEEKEEDKE
MTLEEFEKIREEKRKALLALKTEERKVEVDKDLRSMQPLSTKKGNDDVFIKLGSDKDALK
KKENAERAKKSLSINEFLKPAEGERYYGGRGRGRGRGDRGGFRGGYGGGYRAPPAAPAIQ
DQAEFPSLGGK
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccatgaacccctttgacatcctgggtgccgacgacaacgacgaccccacgcag
ctgctggccgctgccgctgttgcgaagcaaaaggccgagacgaagaagtcggcagcagcg
accgccggaaagggcgcgcagccagccaccgccaagttgctaaccaagcctgcgccccct
gcgcaggccgtgagggattcccgcagtggtggtgcaccctcccgtggaggattcgggcgc
ggtgaacgtggccgtggcagaggcgggcgagggtatggccagaaccgtgagtttggcagc
gaagacgccaatgggtttcaggggggatatggtgctggaggtggtgccagagctggaggt
gaaggcgcccaggacagggagaggggccctcagccaccctaccgtggaggcggtggccgg
cggggtggttaccgtgatggtgagtttggtgatgactctgagaggccgcctcggaggacc
tatgagcgtcacagcggtactggccgtgggtatgaagtgaagcgtgagggtgcaggccgc
gggaactggggaactaccactgatgaaattattgcccaggaaactgaggaaggcctgaag
ctggatgcccctgttcctgagaagcaggatgcacaggaggatgctccacaggcagaggag
aacaaggataataaggatgccactgtgaatgaggaagaagagaaggaagaggataaggag
atgactcttgaggagtttgagaaaataagggaggaaaagcggaaggcacttcttgcctta
aagactgaagagaggaaggttgaagttgataaggatctgcggtctatgcagccactttcc
accaagaaagggaatgatgatgttttcataaaattgggttccgataaggatgcgctgaag
aagaaagaaaatgctgaacgtgctaagaagtctctgagcatcaatgagttcttgaaacct
gctgaaggagaaaggtactatggtggccgtggtcgtggcaggggccgcggggaccgtggg
gggttcagagggggatatggtgggggttatcgcgctccaccggctgctcctgcaattcaa
gaccaagccgaattcccgtcgcttggtgggaagtga
DBGET
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