KEGG   Phragmites australis (common reed): 133929308
Entry
133929308         CDS       T10575                                 
Name
(RefSeq) ras-related protein Rab7-like
  KO
K07897  Ras-related protein Rab-7A
Organism
paua  Phragmites australis (common reed)
Pathway
paua04144  Endocytosis
paua04145  Phagosome
paua04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:paua00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    133929308
   04145 Phagosome
    133929308
   04148 Efferocytosis
    133929308
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:paua04131]
    133929308
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:paua04147]
    133929308
   04031 GTP-binding proteins [BR:paua04031]
    133929308
Membrane trafficking [BR:paua04131]
 Endosome - Lysosome transport
  Rab GTPases and associated proteins
   Rab GTPases
    133929308
Exosome [BR:paua04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   133929308
  Exosomal proteins of other body fluids (saliva and urine)
   133929308
  Exosomal proteins of colorectal cancer cells
   133929308
  Exosomal proteins of bladder cancer cells
   133929308
GTP-binding proteins [BR:paua04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab7/9 [OT]
    133929308
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU MMR_HSR1 Gtr1_RagA ATP_bind_1 RsgA_GTPase AAA_16 AAA_22 Septin AAA_24 cobW AAA_7 nSTAND3 PduV-EutP NTPase_1 AAA_5 NACHT ATPase_2 MCM nSTAND1 AAA DAP3
Other DBs
NCBI-GeneID: 133929308
NCBI-ProteinID: XP_062231995
LinkDB
Position
9:33533669..33536158
AA seq 207 aa
MESSRRRTLLKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKEVLIEDKLVTL
QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLNTWHDEFLNQASPSDPKHFP
FILVGNKIDLDGGSKRMVSEKKAKEWCASKGNIPYFETSAKEDYNVDTAFLCIAKLALEH
EHDQDIYFNTVAEQVPADTEQRSGCDC
NT seq 624 nt   +upstreamnt  +downstreamnt
atggagtcgtcgcggaggcggacgctcctcaaggtcatcgtcctcggcgacagcggggtc
gggaagacgtcgctgatgaaccaatacgtgagcaagaagtttagccagcagtacaaggcg
acaatcggtgccgatttcctcaccaaggaggtcctcatcgaagataagcttgtcaccttg
cagatatgggatacagcagggcaggagcggttccagagtctcggcgtagcattctacaga
ggcgcagattgctgcgtgctagtttacgacgtcaatgttaagagaagctttaacacactc
aatacctggcatgatgagttcctcaaccaagctagcccatcagatcctaaacattttccg
ttcattctggtcgggaacaagattgatttagatggtggaagcaaaagaatggtttctgag
aagaaagcaaaggaatggtgtgcctccaagggcaatatcccctattttgaaacctctgca
aaagaggactacaatgttgacactgcttttctatgcattgccaagcttgctttggagcac
gagcatgatcaagacatttacttcaatacagttgcagaacaagtcccagcggatactgaa
cagagaagcggatgtgactgctag

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