Phragmites australis (common reed): 133929329
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Entry
133929329 CDS
T10575
Name
(RefSeq) uncharacterized protein LOC133929329
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
paua Phragmites australis (common reed)
Pathway
paua03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
133929329
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
paua01002
]
133929329
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
paua04121
]
133929329
03036 Chromosome and associated proteins [BR:
paua03036
]
133929329
03400 DNA repair and recombination proteins [BR:
paua03400
]
133929329
Peptidases and inhibitors [BR:
paua01002
]
Metallo peptidases
Family M67
133929329
Ubiquitin system [BR:
paua04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
133929329
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
133929329
BRISC complex
133929329
Chromosome and associated proteins [BR:
paua03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
133929329
DNA repair and recombination proteins [BR:
paua03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
133929329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
DUF7310
Motif
Other DBs
NCBI-GeneID:
133929329
NCBI-ProteinID:
XP_062232026
LinkDB
All DBs
Position
9:33790278..33796390
Genome browser
AA seq
423 aa
AA seq
DB search
MSLTKVKISEEVWLTGLSHALTTETEEVMGLLLGDVESSSRGGATAVIWGASPQMRCERK
KDRVEVNPELLAAASAQAEKMTATIGKTTRVIGWYHSHPHITVLPSHVDVRTQAMFQLLD
PGFVGLIFSCFSEDAQKVGKIQVIAFQSQSGQQRTIAPVIDLESSWSSSDNALASQSALV
EGIKQDTGDSRASKSSKARGRSPDMDFYSHPDPNHSAKHQPRENTIVAYNRDNTHEASVD
PYDSDMTPSVQEALHRSNMDISGAEYVRKGVKLLVFPTRNLLKLETTLTSYCDMQRVLFE
EEQSAYSQAMQQNICDGKIHPLTSIHHTSTYNSSLCKLMEYCLSPAITSLQDRLKENELR
LSTLQEEAKQLEAETQSMRNDSPLPMMNHGASGSSSPMARNKHPFSNQGNPRSPSSGRWR
RAC
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaccaaggtgaagatcagcgaggaggtgtggctcaccggcctctcccacgcc
ctcaccaccgagaccgaggaggtcatgggcctcctcctcggcgacgtcgagtcttcgagc
aggggcggcgcgaccgccgtgatatggggggcgtcgccgcagatgaggtgcgagcggaag
aaggaccgcgtagaggtcaaccccgagctgctcgccgccgcgtcggcgcaagccgagaaa
atgacggccaccatagggaagactacgagagtgatcggttggtaccactcccacccacat
atcaccgttctgccttcccatgtagatgttcgcacccaagcaatgtttcagttgctggat
ccaggcttcgtggggctgatattttcttgtttcagcgaagatgctcaaaaggttgggaaa
atccaagtgattgcctttcagtcgcagagtggacaacagcgtactatcgctccagtcatt
gaccttgaatcatcctggagttcatcagataatgcattagcatcacaatctgcattggtt
gagggcatcaaacaggatacaggggattccagagcttcaaaaagtagcaaggcccgggga
agatcgccggatatggatttctattctcatcctgacccaaatcattcagcaaagcatcaa
cccagagaaaacactattgttgcttacaatcgggataacacgcatgaagcgtctgttgat
ccatatgattcagatatgaccccaagcgtccaggaggctttgcaccggtcaaatatggac
attagtggtgcagagtatgtaaggaagggggtgaaacttcttgtgttccctacaaggaat
ctgctaaagctggaaacgacattgacttcatactgtgatatgcaacgggtcctttttgaa
gaggaacagtcagcatacagtcaagccatgcaacaaaatatctgtgatgggaaaattcac
cctcttacatctattcaccatacatctacatacaactcttctctctgcaaattaatggag
tactgtttgagtccagctataacttcccttcaggatcgtctgaaggaaaatgaacttcgg
ctgtctacgttacaagaggaggctaaacaacttgaggctgagacccaaagcatgcgaaac
gattcacctctccccatgatgaatcatggggctagtggcagcagttcacccatggctcgg
aacaagcatcctttctccaaccaagggaaccctagaagccccagcagtggcaggtggagg
agggcctgttga
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