Phragmites australis (common reed): 133929335
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Entry
133929335 CDS
T10575
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
paua Phragmites australis (common reed)
Pathway
paua00900
Terpenoid backbone biosynthesis
paua01100
Metabolic pathways
paua01110
Biosynthesis of secondary metabolites
Module
paua_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
133929335
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
paua01006
]
133929335
Enzymes [BR:
paua01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
133929335
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
133929335
Prenyltransferases [BR:
paua01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
133929335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
XrtH_assoc
Motif
Other DBs
NCBI-GeneID:
133929335
NCBI-ProteinID:
XP_062232033
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All DBs
Position
9:complement(33826608..33830640)
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AA seq
304 aa
AA seq
DB search
MLDYNVLGGKCNRGLSVVDSYKLLKGADVLGEDMFLACTLGWCIEWLQAFFLVLDDIMDD
SHTRRGQPCWFRVPQVGFIAVNDGIILRNHISRILRRHFKGKPYYADLLDLFNEVEFKTA
SGQLLDLITTHEGEKDQTKYSITVHRRIVQYKTAYYSFYLPVACALLLSGEDLNNYGTVE
SILVEMGTYFQVQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALKHADESQKRILFEN
YGKKDPACVAKVKNLYKELKLEAVFQEYESESYKKLIADIEAQPSIAVQNVLRSFLHKIY
KRQK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcttgactacaatgtactcggaggcaagtgtaaccgtgggctctctgtggtcgatagc
tataagctgttgaagggtgctgatgttctgggtgaggacatgtttcttgcttgcacactt
ggctggtgcatcgaatggcttcaagctttctttctcgtgcttgacgatatcatggacgac
tctcacactagacgtggccagccttgttggttcagggtgcctcaggttggcttcattgct
gtgaatgacgggatcatccttcgcaaccatatttcacggatccttcggcgtcactttaag
ggaaaaccttactacgctgatctcctagatttattcaatgaggttgagttcaagacagct
tcaggacagctgctggaccttatcacaactcatgagggagaaaaagatcaaacaaaatat
agcataacagttcaccgccgtattgttcaatacaagacagcctactattcattttacttg
ccggttgcatgtgcgctcctgctatctggtgaggatttaaacaactatggtactgtagaa
agcattcttgttgaaatgggaacatacttccaagtccaggatgattatctagattgttac
ggtgatcctgaattcattggcaagattggaactgacattgaagattacaagtgctcctgg
ctagttgtgcaagctctgaagcatgctgatgagagccaaaagcgcattctatttgaaaat
tatggaaagaaagatccagcctgtgtggcaaaagtgaagaatctctacaaagaacttaag
ctagaggcggtatttcaggagtatgagagcgagagctacaagaagctgattgcggatatt
gaagcccagccaagcatcgctgttcagaacgtattgaggtccttcttgcacaagatttac
aagaggcagaagtag
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