Phragmites australis (common reed): 133929400
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Entry
133929400 CDS
T10575
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
paua Phragmites australis (common reed)
Brite
KEGG Orthology (KO) [BR:
paua00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
paua04131
]
133929400
Membrane trafficking [BR:
paua04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
133929400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
133929400
NCBI-ProteinID:
XP_062232121
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Position
9:complement(34699938..34709205)
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AA seq
1041 aa
AA seq
DB search
MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRDDEEASGSRTSNSDRI
GFFNPVMAFMGHNGEEDGTEASEKPQSPKHSSAAEENRGTPTKKHTSEVDASEGSETAQS
PKQPSKLEETHRNSTESAVSGADVSEQPMTPHTPTHPSAAEEKLDGSIESPTPKGDASEV
SEPSQSPTHPSTAEENHSGSIETSSIRKENQDYQDSKHLGPNDEALPSQLGESGRDTPDV
GASSSPTKLDQSSDMETAESIHTGKEDTADGNSSQSQPADSMLGNSDDVDEAEGKIVQEF
DVQKVRSTPQESSDTVDKLTYLEVTVHDDNTNTAENEDESNQTEAGVASVVGQEEDAREQ
LEDLRSKSIISEHDSNSQNELVVTSADMPGGPVEVGSPANSLRKEEKMQESIRSTSSPTL
ESVGSVVELEKLRREIKMMEAALQGAARQSQSKADEIARLMNENEQLKSTIDDLKSKSSE
AEMDALKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIISQVMAEGE
ELSKKQAAQEATIRKLRAQIRELEEEKQRLNSKIQVEETKVESIKRDKAATENLLQETIE
RNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKVELESRLREAGEKENMLIKTIEEL
RHALTRQEQEASFREERLKRDYDDLQKRYQSSELRYNELVTQVPESTRPLLRQIEAMQET
AARREDAWAGVERTLNSRLQEAEAKAAAAEEKERSVNERLSQSLSRITVLETQITILRTE
QTQLSRSLEKERQRASESRQEYLAIKEEAVIQEGRAKHLEEEIKELRAKHKKELQEAAEH
RELLEKDLEREKAARAELEKTSSHEAPKVPLPDQTRNAPLRKLSSAGSINSLEESHFLQA
SLDLSDNTSLERRMSSESNMSYYLRSMTPSAFESALRQKDGELASYISRLDSLESIRNSL
AEELVKMTEQCEKLRTEAAALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVDLK
EMYREQVDLLVSQLQALGARV
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggtcggggaaggtgtcgctgggcgggctgcaggacatcgccggcgccgtc
aacaaaatcagcgagagcgtgaagaacatcgagaagaacttcgacagcgcgctcggcctc
gaggagaagcgcgacgatgaagaagcatcgggatcaaggacatctaactcggatagaata
ggattcttcaatcctgtcatggctttcatgggacataatggcgaggaggatggcactgaa
gcatcagaaaagccacaatctccgaagcattcatcagcagcagaagaaaatcgtggcacc
cccactaagaaacatacatctgaggtagatgcttctgaaggatcagaaacagcacaatct
ccaaagcagccttcaaaattagaagaaactcatagaaactccactgagtcagctgtttct
ggggcggatgtttctgagcaacccatgacaccacacactccaacgcatccttcagcagca
gaagaaaagcttgatggctccattgagtcacctactcctaagggggatgcttctgaggta
tcagaaccatcacaatcgccaacacatccttcaactgcagaagaaaatcatagtggctcc
attgagaccagttcaatcaggaaggaaaaccaggattaccaagatagcaaacatttgggt
cctaatgatgaagctttaccaagtcagcttggagagtctggcagagacacacctgatgtt
ggagcatcttcttcacctaccaagttagatcaatcaagtgacatggaaacagcagaatct
attcatactggaaaggaagatacagctgatgggaactcctctcagtcacaaccagcagat
tccatgctaggtaactcagatgatgtagatgaagctgagggcaagattgttcaagaattt
gatgtccaaaaggtaagaagtaccccacaggagagcagtgacacagttgacaaattaact
tatctagaagtcacagtacatgatgacaatactaatactgctgaaaatgaagatgaaagc
aaccagacagaggcaggggtagcatctgtcgttggacaggaggaggatgcaagggaacag
cttgaagaccttagatcaaagtccataatttcagagcatgattcaaattcgcaaaatgag
ttggtggttacttctgcagatatgcctggtggaccagtagaagtaggttctcctgcaaat
agtttgagaaaagaagaaaagatgcaggaatctattagaagtacaagctctccgactttg
gaatctgttggttctgttgttgagcttgagaaattaagacgtgaaatcaagatgatggaa
gctgcattgcaaggtgctgcaagacaatcccagtccaaagctgatgaaattgcgagattg
atgaatgagaatgagcaattgaaatcaacaattgatgatctcaagagtaagtcatctgaa
gcagaaatggacgcacttaaggatgaatatcaccaaagggtagcaactcttgaaaggaag
gtgtatgcactaaccaaagaacgcgatacattaaggagagagcagaataaaaaaagtgat
gcagctgcccttttgaaagaaaaggatgagattatcagtcaggtcatggctgaaggtgaa
gaactatcaaaaaaacaagctgctcaagaagctactatacgaaaactgagggcacagatt
cgtgagcttgaagaagaaaaacaacgactgaactcaaagatccaggttgaggagactaag
gttgagagtattaagagagataaggcagcaactgagaatttgcttcaagaaacaatagaa
agaaatcagaccgaacttgcagctcagaaggagttctacaccaatgctcttaatgcagct
aaagaggctgaggcattagctgaagcaagagtcaacagcgaagccaaagttgaactggag
agccgtttaagagaagctggtgaaaaagaaaatatgttgattaagacaatcgaggagttg
aggcatgctctcactaggcaagaacaggaggcttctttcagggaagaaaggctaaaaagg
gattatgatgatcttcaaaagcggtatcaatccagtgaacttcgctataatgaactggtc
acacaagttccggagtctaccagaccactcctaaggcaaattgaagccatgcaggagaca
gctgctcgaagggaagacgcttgggctggtgtcgagagaaccttaaactctcgccttcag
gaagcagaagctaaagctgctgccgcagaagaaaaggagcggtctgtaaatgagcgattg
tcacaaagtttatctcggataacagttctggagacccagattacgattctgagaacagag
cagacacagttgagccgatcccttgaaaaggagagacagagagcatctgaaagtagacag
gagtacctagcaattaaagaggaggcggtaatacaagaagggcgggccaaacatcttgaa
gaagaaataaaggagcttagggctaaacacaaaaaggagctgcaagaagcagcagaacac
agggagctgcttgagaaggaccttgaaagggaaaaggctgccagggcagaacttgagaaa
acatcttcccatgaagcacctaaagttccgcttccagatcaaacaagaaatgcccctctc
agaaagctctctagtgctgggagtataaatagtctggaagaaagccattttcttcaagca
tcgttggatttatcggacaatacttcattagagaggagaatgtcctcagaaagtaatatg
tcatattatctgaggtccatgactccaagtgcttttgaatcagcacttcgtcaaaaggat
ggagagctggcttcttacatatcacgcttggactcattggaatctattcggaattcactg
gcagaggagttggtgaaaatgacagaacaatgtgagaagttacggactgaagcagctgct
ctgcctggcttaagggccgaactggaagctctgaaacaaaggcactttcaagctctagaa
cttatgggggaacgtgatgaagagttggaggagctaagaaatgatatcgttgacctaaaa
gagatgtacagggagcaagtggatcttctcgttagccagctccaggcattgggcgctcgt
gtatag
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